Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epicoccum_20nigrum_20[genbank_20GCA_5F002116315.1_202017-05-01] 227 sequences; 34,744,152 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq2 91.5 6e-13 >seq2 Length=3786261 Score = 91.5 bits (100), Expect = 6e-13 Identities = 114/153 (75%), Gaps = 4/153 (3%) Strand=Plus/Minus Query 364425 CAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCGT 364484 |||| ||||||||||||||||||| | | |||||||||| | || || || ||||| Sbjct 903418 CAATTGTCATACGAGAGGGAATGGCGTGCGGGTTGATGACAAGATCCGGGGTCACGCCGT 903359 Query 364485 CAGCGGTAAAGGGCATATCTTCGGGAGGA-ACGATGAGACCAATGGTTCCCTTTTGCGCA 364543 | |||||||||||||| ||| | | ||| | ||||| || |||||||| || | Sbjct 903358 CCCGTGTAAAGGGCATATCCTCGTGCCTATACG-TAAGACCGATAGTTCCCTTCTGTCCG 903300 Query 364544 TAGCGAGAAGCAAACTTGTCGCCAATGACTGGG 364576 | ||||| || |||||||| || || ||||| Sbjct 903299 TGACGAGACGCGAACTTGTCACCGAT--CTGGG 903269 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884880917925711