Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epicoccum_20sorghinum_20[genbank_20GCA_5F001879705.1_202016-11-17] 391 sequences; 33,420,179 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq369 931 0.0 >seq369 Length=7588 Score = 931 bits (1032), Expect = 0.0 Identities = 621/686 (91%), Gaps = 5/686 (1%) Strand=Plus/Minus Query 1 TACGTGACCGGTGGCCTAG-CCGTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAAT 59 |||||| || | |||| |||||| |||| |||||||||||||||||||||||||||| Sbjct 3638 TACGTGGTCGCTAGCCTTTACCGTGTAAAGCCCCTTCGACGAGTCGAGTTGTTTGGGAAT 3579 Query 60 GCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGC 119 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 3578 GCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATACTGGCCAGAGACCGATAGC 3519 Query 120 GCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTG 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3518 GCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTG 3459 Query 180 AAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCCCT 239 |||||||||||||||||||||||||| ||||||||||| | ||||||||| |||| | Sbjct 3458 AAATTGTTGAAAGGGAAGCGCTTGCAGCCAGACTTGCCTGTAGTTGCTCATCCGGGTTTT 3399 Query 240 CGGCCGGTGCACTCTTCTGCGGTCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCC 299 ||||||||||||||| ||| |||||||||||||| | ||||||| ||||||||| | Sbjct 3398 TACCCGGTGCACTCTTCTACGGGCAGGCCAGCATCAGTTTGGGCGGTTGGATAAAGGTCT 3339 Query 300 CGGGAATGTGGCCCCCTTCGGGGGGTG-TTATAGCCCGGGGTGGA-ATGCGGCCCGCCTG 357 | | |||| | || |||||| | |||||| || | || |||| || ||| | Sbjct 3338 CTGTCATGTACCTCCTCTCGGGGAGAACTTATAGG--GGAGACGACATGCAACCAGCCCG 3281 Query 358 GACTGAGGTCCGCGCTCCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGG 417 ||||||||||||||| | ||||||||||||||||||||| |||||||||||||||||| Sbjct 3280 GACTGAGGTCCGCGCATCTGCTAGGATGCTGGCGTAATGGCTGTAAGCGGCCCGTCTTGA 3221 Query 418 AACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTA 477 ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| Sbjct 3220 AACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAGCCCGAGCGCGTA 3161 Query 478 ATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTT 537 ||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| Sbjct 3160 ATGAAAGTGAACGGAGGTGGGAACCTTTCGGGGTGCACCATCGACCGATCCTGATGTCTT 3101 Query 538 CGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGA 597 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 3100 CGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCTTGA 3041 Query 598 ATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCG 657 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 3040 ATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCG 2981 Query 658 ATCGTCAAATTTGGGTATAGGGGCGA 683 ||||||||||||||| |||||||||| Sbjct 2980 ATCGTCAAATTTGGGCATAGGGGCGA 2955 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079991613050