Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Epicoccum_20sorghinum_20[genbank_20GCA_5F001879705.1_202016-11-17]
391 sequences; 33,420,179 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq369 931 0.0
>seq369
Length=7588
Score = 931 bits (1032), Expect = 0.0
Identities = 621/686 (91%), Gaps = 5/686 (1%)
Strand=Plus/Minus
Query 1 TACGTGACCGGTGGCCTAG-CCGTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAAT 59
|||||| || | |||| |||||| |||| ||||||||||||||||||||||||||||
Sbjct 3638 TACGTGGTCGCTAGCCTTTACCGTGTAAAGCCCCTTCGACGAGTCGAGTTGTTTGGGAAT 3579
Query 60 GCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGC 119
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 3578 GCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATACTGGCCAGAGACCGATAGC 3519
Query 120 GCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTG 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3518 GCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTG 3459
Query 180 AAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCCCT 239
|||||||||||||||||||||||||| ||||||||||| | ||||||||| |||| |
Sbjct 3458 AAATTGTTGAAAGGGAAGCGCTTGCAGCCAGACTTGCCTGTAGTTGCTCATCCGGGTTTT 3399
Query 240 CGGCCGGTGCACTCTTCTGCGGTCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCC 299
||||||||||||||| ||| |||||||||||||| | ||||||| ||||||||| |
Sbjct 3398 TACCCGGTGCACTCTTCTACGGGCAGGCCAGCATCAGTTTGGGCGGTTGGATAAAGGTCT 3339
Query 300 CGGGAATGTGGCCCCCTTCGGGGGGTG-TTATAGCCCGGGGTGGA-ATGCGGCCCGCCTG 357
| | |||| | || |||||| | |||||| || | || |||| || ||| |
Sbjct 3338 CTGTCATGTACCTCCTCTCGGGGAGAACTTATAGG--GGAGACGACATGCAACCAGCCCG 3281
Query 358 GACTGAGGTCCGCGCTCCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGG 417
||||||||||||||| | ||||||||||||||||||||| ||||||||||||||||||
Sbjct 3280 GACTGAGGTCCGCGCATCTGCTAGGATGCTGGCGTAATGGCTGTAAGCGGCCCGTCTTGA 3221
Query 418 AACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTA 477
||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||
Sbjct 3220 AACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAGCCCGAGCGCGTA 3161
Query 478 ATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTT 537
||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||
Sbjct 3160 ATGAAAGTGAACGGAGGTGGGAACCTTTCGGGGTGCACCATCGACCGATCCTGATGTCTT 3101
Query 538 CGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGA 597
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 3100 CGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCTTGA 3041
Query 598 ATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCG 657
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 3040 ATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCG 2981
Query 658 ATCGTCAAATTTGGGTATAGGGGCGA 683
||||||||||||||| ||||||||||
Sbjct 2980 ATCGTCAAATTTGGGCATAGGGGCGA 2955
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079991613050
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |