Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epicoccum_20sorghinum_20[genbank_20GCA_5F001879705.1_202016-11-17] 391 sequences; 33,420,179 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq107 98.7 3e-18 >seq107 Length=32175 Score = 98.7 bits (108), Expect = 3e-18 Identities = 271/410 (66%), Gaps = 13/410 (3%) Strand=Plus/Plus Query 15 ATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTTAC 74 |||||||| || ||| || |||||||||| | | |||||||| ||||||| Sbjct 16209 ATCTTCACTGCCATTCCAGTTTCACTGAGCCAATCATTGAGACAGCTGTTGCATCGTTGG 16268 Query 75 GCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATT 134 ||||| ||| | | | ||| | ||||| ||||||||||||||||||| |||| Sbjct 16269 ATCATTCATGCGCGACATCATTTAAATGCCAAGGTATTTCGCTACCTTAGGACCCTTATA 16328 Query 135 GTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCT-TCGCGTT--AGCTAACCCCAT 191 | || ||||||| || | |||| ||| |||| | || | || | ||| | || Sbjct 16329 GATAAGGCCGCCATTCAATGGGGGTTCCTTCAAAACCTAAAGTATTTCATTTAAGCAAAT 16388 Query 192 CAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTT-TGC 250 | |||||| || || |||||| | ||| |||||| | | || | | || || Sbjct 16389 CCGTTAACCAGCCATCATTGGGCAGATAGCGCACTCTATACATTGATTTACATCTTACGC 16448 Query 251 AGAGTGCTGTGTTTTTAATAAACAGTC--GCAGCGGCCTGGTATCTTCGACCGGCATGAG 308 | ||||||||||||| | ||||||||| ||| | | | ||| | | | | | Sbjct 16449 AAAGTGCTGTGTTTTAATTAAACAGTCGTGCAACACCATTTTATGTCTCCTCTTCCTAAA 16508 Query 309 CTTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGTGCCTTT 368 || | | || ||| | ||| |||||| |||| |||||||||| | || Sbjct 16509 CTGA--TATTAA-----TCAGTAGGAATGGCACACCTTTTCCCTCAGTTACGGTGTCATT 16561 Query 369 TTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTAC 418 ||||| |||||||| ||| ||||| |||||| ||||||||||| Sbjct 16562 TTGCCGAGTTCCTTAATGATTGTTAGCTCAAACGCCTTCGTATTCTCTAC 16611 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260795070272