Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Epicoccum_20sorghinum_20[genbank_20GCA_5F001879705.1_202016-11-17]
391 sequences; 33,420,179 total letters
Query= AAMG01000636.1
Length=426
Score E
Sequences producing significant alignments: (Bits) Value
seq107 98.7 3e-18
>seq107
Length=32175
Score = 98.7 bits (108), Expect = 3e-18
Identities = 271/410 (66%), Gaps = 13/410 (3%)
Strand=Plus/Plus
Query 15 ATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTTAC 74
|||||||| || ||| || |||||||||| | | |||||||| |||||||
Sbjct 16209 ATCTTCACTGCCATTCCAGTTTCACTGAGCCAATCATTGAGACAGCTGTTGCATCGTTGG 16268
Query 75 GCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATT 134
||||| ||| | | | ||| | ||||| ||||||||||||||||||| ||||
Sbjct 16269 ATCATTCATGCGCGACATCATTTAAATGCCAAGGTATTTCGCTACCTTAGGACCCTTATA 16328
Query 135 GTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCT-TCGCGTT--AGCTAACCCCAT 191
| || ||||||| || | |||| ||| |||| | || | || | ||| | ||
Sbjct 16329 GATAAGGCCGCCATTCAATGGGGGTTCCTTCAAAACCTAAAGTATTTCATTTAAGCAAAT 16388
Query 192 CAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTT-TGC 250
| |||||| || || |||||| | ||| |||||| | | || | | || ||
Sbjct 16389 CCGTTAACCAGCCATCATTGGGCAGATAGCGCACTCTATACATTGATTTACATCTTACGC 16448
Query 251 AGAGTGCTGTGTTTTTAATAAACAGTC--GCAGCGGCCTGGTATCTTCGACCGGCATGAG 308
| ||||||||||||| | ||||||||| ||| | | | ||| | | | | |
Sbjct 16449 AAAGTGCTGTGTTTTAATTAAACAGTCGTGCAACACCATTTTATGTCTCCTCTTCCTAAA 16508
Query 309 CTTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGTGCCTTT 368
|| | | || ||| | ||| |||||| |||| |||||||||| | ||
Sbjct 16509 CTGA--TATTAA-----TCAGTAGGAATGGCACACCTTTTCCCTCAGTTACGGTGTCATT 16561
Query 369 TTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTAC 418
||||| |||||||| ||| ||||| |||||| |||||||||||
Sbjct 16562 TTGCCGAGTTCCTTAATGATTGTTAGCTCAAACGCCTTCGTATTCTCTAC 16611
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1260795070272
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |