Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epicoccum_20sorghinum_20[genbank_20GCA_5F001879705.1_202016-11-17] 391 sequences; 33,420,179 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq107 87.8 4e-15 >seq107 Length=32175 Score = 87.8 bits (96), Expect = 4e-15 Identities = 259/388 (67%), Gaps = 46/388 (12%) Strand=Plus/Plus Query 9 ATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAG----TGCCCAAATCG 64 |||||||| | ||| || |||||| ||| | || ||||||||| ||| |||| Sbjct 16209 ATCTTCACTGCCATTCCAGTTTCACTGAGCCAATCATTGAGACAGCTGTTGC----ATCG 16264 Query 65 TTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 124 || | ||| |||| | | | ||| | ||||| ||||||||||||||||||| | Sbjct 16265 TTGGATCATTCATGCGCGACATCATTTAAATGCCAAGGTATTTCGCTACCTTAGGACCCT 16324 Query 125 TATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGA----TTGCTCTAA- 179 ||||| || ||||||| || | ||||| || |||| | | | || | ||| Sbjct 16325 TATAGATAAGGCCGCCATTCAATGGGGGTT-CCTTCAAAACCTAAAGTATTTCATTTAAG 16383 Query 180 CAGATCCCCTTAACCTTCCAGCACCGGGCAG---GCGTCAGCTCCTATACATCGTCTTGC 236 || || || |||||| ||| || |||||| ||| || || |||||||| | || | Sbjct 16384 CAAAT-CCGTTAACCAGCCATCATTGGGCAGATAGCG-CA-CT-CTATACATTGATTTAC 16439 Query 237 GACTTA-GCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCC-------TAT-TCTC 287 |||| ||| | ||||||||| |||||||||| || | ||| |||| Sbjct 16440 ATCTTACGCAAAGTGCTGTGTTTTAATTAAACAGTCG--TGCAACACCATTTTATGTCTC 16497 Query 288 TGCGGCCT---GTCATA-----------GACAGGCACCCCTTCTCCCTAAGTTACGGGGT 333 | ||| | ||| || ||||| |||| ||||| |||||||| || Sbjct 16498 CTCTTCCTAAACTGATATTAATCAGTAGGAATGGCACACCTTTTCCCTCAGTTACGGTGT 16557 Query 334 CATTTTGCCGAGTTCCTTAACAATAGTT 361 |||||||||||||||||||| || ||| Sbjct 16558 CATTTTGCCGAGTTCCTTAATGATTGTT 16585 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062395846016