Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Epicoccum_20sorghinum_20[genbank_20GCA_5F001879705.1_202016-11-17]
391 sequences; 33,420,179 total letters
Query= AAMG01000753.1
Length=364
Score E
Sequences producing significant alignments: (Bits) Value
seq107 87.8 4e-15
>seq107
Length=32175
Score = 87.8 bits (96), Expect = 4e-15
Identities = 259/388 (67%), Gaps = 46/388 (12%)
Strand=Plus/Plus
Query 9 ATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAG----TGCCCAAATCG 64
|||||||| | ||| || |||||| ||| | || ||||||||| ||| ||||
Sbjct 16209 ATCTTCACTGCCATTCCAGTTTCACTGAGCCAATCATTGAGACAGCTGTTGC----ATCG 16264
Query 65 TTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 124
|| | ||| |||| | | | ||| | ||||| ||||||||||||||||||| |
Sbjct 16265 TTGGATCATTCATGCGCGACATCATTTAAATGCCAAGGTATTTCGCTACCTTAGGACCCT 16324
Query 125 TATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGA----TTGCTCTAA- 179
||||| || ||||||| || | ||||| || |||| | | | || | |||
Sbjct 16325 TATAGATAAGGCCGCCATTCAATGGGGGTT-CCTTCAAAACCTAAAGTATTTCATTTAAG 16383
Query 180 CAGATCCCCTTAACCTTCCAGCACCGGGCAG---GCGTCAGCTCCTATACATCGTCTTGC 236
|| || || |||||| ||| || |||||| ||| || || |||||||| | || |
Sbjct 16384 CAAAT-CCGTTAACCAGCCATCATTGGGCAGATAGCG-CA-CT-CTATACATTGATTTAC 16439
Query 237 GACTTA-GCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCC-------TAT-TCTC 287
|||| ||| | ||||||||| |||||||||| || | ||| ||||
Sbjct 16440 ATCTTACGCAAAGTGCTGTGTTTTAATTAAACAGTCG--TGCAACACCATTTTATGTCTC 16497
Query 288 TGCGGCCT---GTCATA-----------GACAGGCACCCCTTCTCCCTAAGTTACGGGGT 333
| ||| | ||| || ||||| |||| ||||| |||||||| ||
Sbjct 16498 CTCTTCCTAAACTGATATTAATCAGTAGGAATGGCACACCTTTTCCCTCAGTTACGGTGT 16557
Query 334 CATTTTGCCGAGTTCCTTAACAATAGTT 361
|||||||||||||||||||| || |||
Sbjct 16558 CATTTTGCCGAGTTCCTTAATGATTGTT 16585
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1062395846016
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |