Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epicoccum_20sorghinum_20[genbank_20GCA_5F001879705.1_202016-11-17] 391 sequences; 33,420,179 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq107 87.8 5e-15 >seq107 Length=32175 Score = 87.8 bits (96), Expect = 5e-15 Identities = 139/195 (71%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 296 GGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGAC 355 ||||| | | ||| |||||||| || | || | ||||||| | |||||| ||| | | Sbjct 27699 GGGACTAAGACAAGTCATCATGGCCTTAATATTGTGGGCTATAGACGTGCCACATGTGCC 27758 Query 356 AATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCG 415 ||||||||| || | | |||| | ||| |||||| |||| | | ||| | Sbjct 27759 TTTACAAAGGGATGCAATAATGCGAATTGGAGCTAATCCCCTAAAATAGGATAAAGTATG 27818 Query 416 GATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGT-AG--ATCAG 472 |||||||||||| || |||||| ||||| ||||| ||||||||||| || |||| Sbjct 27819 GATTGTAGTCTGAAATTCGACTGCATGAAAAAGGAATTACTAGTAATCGTGAGTAATCA- 27877 Query 473 CATGCTACGGTGAAT 487 ||| ||||||||| Sbjct 27878 CAT--CACGGTGAAT 27890 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503994119360