Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Epicoccum_20sorghinum_20[genbank_20GCA_5F001879705.1_202016-11-17]
391 sequences; 33,420,179 total letters
Query= AAMG01000811.1
Length=502
Score E
Sequences producing significant alignments: (Bits) Value
seq107 87.8 5e-15
>seq107
Length=32175
Score = 87.8 bits (96), Expect = 5e-15
Identities = 139/195 (71%), Gaps = 6/195 (3%)
Strand=Plus/Plus
Query 296 GGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGAC 355
||||| | | ||| |||||||| || | || | ||||||| | |||||| ||| | |
Sbjct 27699 GGGACTAAGACAAGTCATCATGGCCTTAATATTGTGGGCTATAGACGTGCCACATGTGCC 27758
Query 356 AATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCG 415
||||||||| || | | |||| | ||| |||||| |||| | | ||| |
Sbjct 27759 TTTACAAAGGGATGCAATAATGCGAATTGGAGCTAATCCCCTAAAATAGGATAAAGTATG 27818
Query 416 GATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGT-AG--ATCAG 472
|||||||||||| || |||||| ||||| ||||| ||||||||||| || ||||
Sbjct 27819 GATTGTAGTCTGAAATTCGACTGCATGAAAAAGGAATTACTAGTAATCGTGAGTAATCA- 27877
Query 473 CATGCTACGGTGAAT 487
||| |||||||||
Sbjct 27878 CAT--CACGGTGAAT 27890
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1503994119360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |