Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epicoccum_20sorghinum_20[genbank_20GCA_5F001879705.1_202016-11-17] 391 sequences; 33,420,179 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq369 352 5e-95 >seq369 Length=7588 Score = 352 bits (390), Expect = 5e-95 Identities = 233/257 (91%), Gaps = 1/257 (0%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4622 ACTCGTTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 4681 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||||||||||||| |||| || ||| ||||||||||||||||||| || Sbjct 4682 CCTGTTATTGCCTCAAACTTCCATCGGCTTGA-GCCGATAGTCCCTCTAAGAAGCCGGCG 4740 Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181 |||| ||| || ||||||||||||||||||||||||||||||||||| |||||| Sbjct 4741 ACCAGCCAAAGCTAGCCTGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGCAATTAA 4800 Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241 ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| Sbjct 4801 GCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCTGAAAAATCAAGAA 4860 Query 242 AGAGCTATCAATCTGTC 258 |||||| |||||||||| Sbjct 4861 AGAGCTCTCAATCTGTC 4877 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796796981871