Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Epicoccum_20sorghinum_20[genbank_20GCA_5F001879705.1_202016-11-17]
391 sequences; 33,420,179 total letters
Query= AAMG01001634.1
Length=217
Score E
Sequences producing significant alignments: (Bits) Value
seq369 187 3e-45
>seq369
Length=7588
Score = 187 bits (206), Expect = 3e-45
Identities = 175/215 (81%), Gaps = 6/215 (3%)
Strand=Plus/Plus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
|||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||
Sbjct 5266 CTAGAAACCAACAAAATAGGACCGCACGTCCTATTCTATTATTCCATGCTAACGTATTCG 5325
Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125
|| | |||||||||||||||||||||||| |||| ||||||||||||||||| | ||
Sbjct 5326 AGCAAAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTGGTTCCCCAACA 5385
Query 126 CA-CCAATGAA-GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGC-AGTACTCGC 182
|| ||| |||| ||||| || || ||| ||| | ||| || | ||||| |||
Sbjct 5386 CACCCAGTGAAGGGCAT-GAGGTTCTCCAGAAGGAAAGGCCCGGCCGGACAAGTACACGC 5444
Query 183 CGTGAGGCGGACCATAGCACCCA-GCCCGAGTTTC 216
|||||||||||| | || ||| |||| ||||||
Sbjct 5445 GGTGAGGCGGACC-TGCCAGCCAGGCCCAAGTTTC 5478
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595197745494
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |