Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epicoccum_20sorghinum_20[genbank_20GCA_5F001879705.1_202016-11-17] 391 sequences; 33,420,179 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq369 187 3e-45 >seq369 Length=7588 Score = 187 bits (206), Expect = 3e-45 Identities = 175/215 (81%), Gaps = 6/215 (3%) Strand=Plus/Plus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 |||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| Sbjct 5266 CTAGAAACCAACAAAATAGGACCGCACGTCCTATTCTATTATTCCATGCTAACGTATTCG 5325 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125 || | |||||||||||||||||||||||| |||| ||||||||||||||||| | || Sbjct 5326 AGCAAAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTGGTTCCCCAACA 5385 Query 126 CA-CCAATGAA-GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGC-AGTACTCGC 182 || ||| |||| ||||| || || ||| ||| | ||| || | ||||| ||| Sbjct 5386 CACCCAGTGAAGGGCAT-GAGGTTCTCCAGAAGGAAAGGCCCGGCCGGACAAGTACACGC 5444 Query 183 CGTGAGGCGGACCATAGCACCCA-GCCCGAGTTTC 216 |||||||||||| | || ||| |||| |||||| Sbjct 5445 GGTGAGGCGGACC-TGCCAGCCAGGCCCAAGTTTC 5478 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595197745494