Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epicoccum_20sorghinum_20[genbank_20GCA_5F001879705.1_202016-11-17] 391 sequences; 33,420,179 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq369 286 6e-75 >seq369 Length=7588 Score = 286 bits (316), Expect = 6e-75 Identities = 234/279 (84%), Gaps = 8/279 (3%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| | Sbjct 873 GTACGAGAGGAACCGCGGT-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGACCAGGCATT 816 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 815 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 756 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGG-CTTCGGCCCCGAA 179 ||||||||||||| | ||||||| ||||||||||||||||| ||| ||||| ||| Sbjct 755 GAACGGGGTGATTTCCGCCTGCAC----CAGTCGGATACGAATAGGCCTTTGGCCCAGAA 700 Query 180 CCTTAGCAGGCCGGCAACGGGCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGATTGC 239 ||||| ||| |||| || | | | ||| ||| | || ||| || | ||||| Sbjct 699 CCTTACCAGATCGGCGTTGGTGGCCTCATTGAAATTGGGGTCACT-AGCCGGTGTATTGC 641 Query 240 AATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 |||| || |||||||| | ||||||||||||||||| Sbjct 640 AATTGTACAGTGCGCAGGATTGAATCCTTTGCAGACGAC 602 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819196897024