Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epicoccum_20sorghinum_20[genbank_20GCA_5F001879705.1_202016-11-17] 391 sequences; 33,420,179 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq332 372 2e-98 seq289 134 1e-26 >seq332 Length=679357 Score = 372 bits (412), Expect = 2e-98 Identities = 1235/1889 (65%), Gaps = 70/1889 (4%) Strand=Plus/Plus Query 65077 ATCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGT 65136 |||||| |||||||| || | || || ||| |||| | || |||||||| || || Sbjct 208464 ATCGACAGTGAACTGAATAGGTGCAGAGGCAGCCATGGTTCGGAGGTAGTACATTCCAGT 208523 Query 65137 CTTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAAT-TCGGCT 65195 |||||||||| ||| || || ||||| |||| | || |||| | | |||| Sbjct 208524 CTTGAGGCCAAGCTTCCATCCAGCAAAGTGCATGGATG-TGATCTTGCCCATGGTAGGCT 208582 Query 65196 CGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCA 65255 | || || || |||| |||||| ||| || ||| | |||||| || || |||| Sbjct 208583 CCTTCATGTGAATGTTCAGAGACTGAGACTGGTCAATGAAGGCACCACGGTCAGCGGCCA 208642 Query 65256 TGTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGT--ACCTC 65313 | | ||||| ||| ||| |||||||||||||||||||| || || | | ||| Sbjct 208643 TCTGGATGATGGTACGCTGCGAGATCTCCCAGACGGTCTTGTAGAGA--ACCTTGATCTC 208700 Query 65314 AATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCAT 65373 | ||||| | ||| ||||| || |||| ||||| ||||| || ||| Sbjct 208701 ATCAGGAATGTTAGGGATGCGCTGGATGGATCCACCCTCGGCAATGATGCGGTTCTTCAT 208760 Query 65374 CGACTCTGACCACAAACCCAAATCGATAAGATG-TTGA---ACCAAGTGACGATTGATGA 65429 ||||| ||| | ||||| |||| ||||| |||| |||||| | |||| || Sbjct 208761 GTTCTCTGTCCAGAGACCCATGTCGACAAGATCCTTGAGCAACCAAGGG----TTGACGA 208816 Query 65430 CTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGG 65489 | |||||||| || | || ||||||||| ||||||||| || ||| || || ||| Sbjct 208817 CCTGGAACTCTCCAGCAAGCACACGACGGGAATAGATGTTCGAGGTGTAAGGCTCGAAGC 208876 Query 65490 ATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATG 65549 | || |||| || ||||| |||| ||||| ||||| |||||||| || | | || | Sbjct 208877 ACTCGTTGTTACCAAGAATCTGGGAGGTAGAGGCAGTGGGCATGGGCGCAATGAGCAGAG 208936 Query 65550 AGTTTCGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCACATCGGTT 65609 |||| || | |||| | | || |||| || | |||||| ||| | | | Sbjct 208937 AGTTGCGGACACCGTGCTGGGCGATCTTGTCCTTCAGCGAGGCCCAGTCCCAGA---GAT 208993 Query 65610 TATCGTCGACATCCACGGGCCACATATCCTGTTGCAG--GGTTC--CGATACTGGCCGGT 65665 | || | | ||| |||||| || | ||||| || | ||| || ||| Sbjct 208994 CA--GTGGGGGTG-ACGCCCCACATGTCGTACTGCAGCTGGCCCTGCGAAACAGGC---- 209046 Query 65666 GAACCGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACA-GCTGGTCTCGAG 65724 || || | | || |||| || |||||||||| | || | | || || Sbjct 209047 GAGCCTTCGTACGTAGCGTAAGGACCAAGCTCCTTGGCAGTCTCGCAAGAAGAGGTC-AG 209105 Query 65725 TGCGGCAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTC 65784 || || ||||||||||||||| || | || || | |||||| ||| Sbjct 209106 AGCAGCGTGATAAATGGTCTCGAAGATCTGGATGTTGAGCTTCTTAGCCTCAGGTGACTC 209165 Query 65785 GTACGGCATACCCATCAG-GACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGG 65843 | | |||| | | | || || |||| ||| || |||||||| || |||| ||| || | Sbjct 209166 GAAAGGCA-AGCGAAGAGCGAGGAAAGCGTCAGCAAGACCTTGGACACCAAGACCAATAG 209224 Query 65844 GACGATGACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAA 65903 | | ||||| || ||| || | ||||| || || |||| || | ||||| | Sbjct 209225 GCCTGTGACGGAAGTTGCTGCGGCGTGCCTCCTCAACGGGATAGTGGTTAACCTCGATGA 209284 Query 65904 TGCGATTCAAATTGCGTGTCACCACATGCACGATACGTCGCAATTGTTC--GAAATCAAA 65961 | || | |||||| || || ||||||| | ||| | ||| |||||| || Sbjct 209285 TCTTGTTAAGATTGCGAGTGCAGACCTGCACGA--CCTCGTGAAGCTTCTTGAAATCGAA 209342 Query 65962 ATGTTTAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAG 66021 | | | || | | ||| | || || ||| || |||| || || || Sbjct 209343 CTCTCCA---CGCTTGT-AGT--------CGACGAAGGAGGGCAGAGCAACGGAGGCAAG 209390 Query 66022 GTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACT 66081 |||||||||||| | ||| ||||| ||||| ||||||| || || ||||||| ||| Sbjct 209391 GTTGCAGACAGCAACCTCATCAGGCGCGGTGTACTCGATGATCTCAGTGCACAAATTCGA 209450 Query 66082 GCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACAT 66141 || ||| ||||| || | |||| || || ||||| | ||| ||||||||||| | Sbjct 209451 GCTGCGAATGGTACCGAGGTTCTTCTGGTTGCTCTTCCTGTTGGCAGCATCCTTGTAGAG 209510 Query 66142 CATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAG------AGC 66195 |||| | || | || |||||| || | ||||| ||||||| ||| || ||| Sbjct 209511 CATGAAGGGGTTACCAGTCTCAGTCTGAGCCTCAAGAATGGCGTACCAGAGCTTCTGAGC 209570 Query 66196 GCGTGCCTTCACCGTACGTACCGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTC 66255 || | || | || || |||| |||| ||||| | ||||| ||| | Sbjct 209571 ACGGACAGTCTCGCGACC-ACGACCCT-CCTTC----TCGTACTTCTCGTAAAGGGCAAC 209624 Query 66256 GAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCA 66315 ||| || || | || || | || | || |||| || |||||||| || | ||| Sbjct 209625 GAACTCGTCGCCGTAGACGTCAGCGAGGCCAGGGCACTCGTTGGGACACATAAGGGTCCA 209684 Query 66316 ATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAG 66375 || || | || || ||||| |||| || ||||| || ||||| | || |||||||| Sbjct 209685 CTCGCCGTTCTCTTGCACACGCTGCATGAAGAGATCGGGAATCCACAAAGCATAGAAGAG 209744 Query 66376 ATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGAT 66435 |||||| || || |||||| ||||||| || || | || ||||||||| |||||| Sbjct 209745 ATCGCGAGCACGAACCTCCTCCTTGCCGTGGTTCTTCCTCAGGTCGAGGAAGCCAAAGAC 209804 Query 66436 GTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTG 66495 ||| || ||||| || || ||||||||||| || | || || ||| |||||| || Sbjct 209805 GTCAGCGTGCCACGGCTCGAGGTAGATGGCAAAAGCACCAGGGCGCTTGTTGCCACCCTG 209864 Query 66496 GTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTT 66555 |||||| || || ||| |||||| ||||||| | ||| || | | ||||| ||| | Sbjct 209865 GTCGACATAACGGGCGGTGTTGTTGTAGACACGGAGCATAGGAATCAAACCGTTTGATGT 209924 Query 66556 GCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAAT 66615 || ||||| || | ||| || || || || || ||| || || || ||||| Sbjct 209925 TCCGTTGGTTCCTCCAATGTACGAGCCGGTGGCACGAATGCGGTGGACGTTGAGGCCAAT 209984 Query 66616 ACCACCGGCCGTCTTCGAGATGGCAGCACA-ATCGGCCAC-TGTCCGGAATATGCCGTCA 66673 ||| || || ||||| ||||| || || || | | |||| | | || || ||| Sbjct 209985 ACCGCCAGCAGTCTTGGAGATCAACGCGCAGGTCTTCAGCGTGTC--GTAGATACCCTCA 210042 Query 66674 ATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGA--ACTAAGTTGGGGTTTGGGTGTGG 66731 ||| ||| |||| ||| | |||| |||| || || ||||| | |||||| Sbjct 210043 ATGCTGTCCTCCTTCATGTCGATGAGGAAGCAGGATGACATCTGTGGGGAT--GGTGTGC 210100 Query 66732 CGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACG 66791 |||| |||||| || || | ||||| || ||||| | | |||||||| | ||| | Sbjct 210101 CGGCATTGAAGAGTGTCGGCGACGCGTGTGTGAAGTACTTCTGCGACATGTAGTCGTATG 210160 Query 66792 TCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGC-ACATCGCATCAGGAGG 66850 |||||||| | ||||||| || || || || | || ||| ||||| || | | Sbjct 210161 TCTCGATGGCCTTCTCAATGTCCTCCATGTGGATGCCAACAGCGACA-CGCATGAGCATG 210219 Query 66851 TATTGAGGCCGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTC 66910 | || || || ||| | | | | ||||| | | | || ||||| ||||||||| Sbjct 210220 TGCTGCGGGCGCTCGGCAACCTTGCCATTGATGCGGAGCAGATATGAGCGCTCCAGGGTC 210279 Query 66911 TTGATACCAAAGTACGAGTAATTGAAATC 66939 |||| || ||| || ||| ||||| || Sbjct 210280 TTGAAGCCGAAGAACTGGTAGTTGAAGTC 210308 >seq289 Length=227737 Score = 134 bits (148), Expect = 1e-26 Identities = 208/295 (71%), Gaps = 9/295 (3%) Strand=Plus/Minus Query 61090 TGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCC 61149 |||| |||||||| ||||| || ||||| |||||||| | |||||| ||||| | ||| Sbjct 106049 TGGCAAATGTACAAGAAGGCCGAGGCTTCTTTCTGGACCGCAGAGGAGATCGATCTCTCC 105990 Query 61150 AAAGACATGAATGACTGGGA---GCGTTTATCGAGCGGTGAACAACATTTCATTAAA--- 61203 || ||| | | |||||| | |||| | | || ||| | | |||| | | Sbjct 105989 AAGGACCTTCACGACTGGAACAAGCGTCTC---AACGATGACGAGCGTTTCTTCATCTCC 105933 Query 61204 CATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGT 61263 || || | || ||||| || || || ||||| || ||||| ||||| | | || || Sbjct 105932 CACGTCCTCGCTTTCTTCGCTGCCTCCGACGGCATTGTCAACGAGAACCTTGTCGAGCGC 105873 Query 61264 TTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATG 61323 ||| | ||||| || | | ||||| || || |||||||||||||||||| ||| Sbjct 105872 TTCTCTGGCGAGGTACAGATCCCCGAGGCACGATGCTTCTACGGCTTCCAGATTATGATG 105813 Query 61324 GAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGC 61378 ||||| |||||| | |||| ||| | | |||||||| || |||||||| |||| Sbjct 105812 GAGAACGTCCACGCCGAGACATACTCTCTCCTCATCGACACCTACATCAGCGAGC 105758 Score = 125 bits (138), Expect = 6e-24 Identities = 278/414 (67%), Gaps = 11/414 (3%) Strand=Plus/Minus Query 61522 TTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGT 61581 || ||||| || ||||| || | ||||| ||| ||||||| ||||| |||||||||||| Sbjct 105564 TTCTTCAGCGGTTCGTTCGCGTCCATCTTCTGGCTGAAGAAGCGTGGTCTTATGCCCGGT 105505 Query 61582 CTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTGCTGTT 61641 || || ||| ||| ||| | || || ||||||||||||||||| || |||||| Sbjct 105504 CTCACATTCTCCAACGAGCTCATCTCTCGCGACGAGGGCATGCACACCGACTTTGCTTGC 105445 Query 61642 TTGCTATTCAAACGCTAT-CTGGTGAATCGTCCGTCGGAGGAGCGTGTGGGTGAGATTGT 61700 | || || | || | ||| || || || ||||| || | | || | Sbjct 105444 CTTCTCTT----CTCTTTGCTGAACAACCGCCCAAGCAAGGAGGCCGTCGCAGCCATCAT 105389 Query 61701 TCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCCGTCTCACTCAT 61760 ||||| || || ||||| ||||| || || | || || |||| | || | Sbjct 105388 CACCGAGGCCGTTACAATCGAGCAGGAGTTCTTGTCCGATGCCCTGCCTTGTGCCCTGCT 105329 Query 61761 CGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTGTTGGT 61820 ||||||||| || || |||| ||||| ||||| || || |||||||| ||| || | Sbjct 105328 CGGCATGAACGCCGGTCTCATGTGCCAGTACATTGAGTTCGTCGCCGACCGCCTGCTGCT 105269 Query 61821 CGATTTGGGTA---TGAAGCGGATCTATAATACGAAAAACCCATTTGATTTCATGGACAT 61877 | | || | |||| ||| || | | ||||| || || |||||||| | Sbjct 105268 GGCCCTCGGCAACCCCAAGC---ACTACAACGCCACCAACCCCTTCGACTTCATGGAGAA 105212 Query 61878 GATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGTGTAGGCGACTATCA 61931 || || || | ||||||||| || || |||||||| || || || ||||| || Sbjct 105211 CATCTCTCTTGCTGGCAAGACCAACTTCTTCGAGAAGCGCGTTGGTGACTACCA 105158 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397566105464240