Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epicoccum_20sorghinum_20[genbank_20GCA_5F001879705.1_202016-11-17] 391 sequences; 33,420,179 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq297 91.5 6e-13 >seq297 Length=250371 Score = 91.5 bits (100), Expect = 6e-13 Identities = 157/221 (71%), Gaps = 8/221 (4%) Strand=Plus/Plus Query 364353 TGAAAGCGGTAGCATTAACCCTCTCTCCTCGCAA-GGCTCCCACCTTGGA--GGCTACAA 364409 |||| | ||||||| | || |||| || | | |||||| |||||||| || ||| Sbjct 210733 TGAAGGGTGTAGCATCA-CCTTCTCGCCCGGTGATGGCTCCGACCTTGGAAAGGAGACA- 210790 Query 364410 TCTCCATGAGCTTACCAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGT 364469 ||| | | | |||| ||||||||||||||||||| | | |||||||||| | | Sbjct 210791 -CTCGACCAAATGGGCAATGGTCATACGAGAGGGAATGGCGTGCGGGTTGATGACAAGAT 210849 Query 364470 CAGGCACCATGCCGTCAGCGGTAAAGGGCATATCTTCG-GGAGGAACGATGAGACCAATG 364528 | || | ||||| || || |||||||||||| | | ||| ||||||| ||| Sbjct 210850 CGGGAGTGACACCGTCTCTTGTGAAAGGCATATCTTCGTGTCTGTACG-TGAGACCGATG 210908 Query 364529 GTTCCCTTTTGCGCATAGCGAGAAGCAAACTTGTCGCCAAT 364569 || ||||| || | | |||||||| ||||||||||| || Sbjct 210909 GTACCCTTCTGTCCGTGACGAGAAGCGAACTTGTCGCCGAT 210949 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884876957308163