Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798715.1_202014-12-08] 5,935 sequences; 52,505,057 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq5931 288 1e-75 seq32 264 2e-68 seq5878 250 4e-64 seq5713 127 3e-27 >seq5931 Length=704 Score = 288 bits (318), Expect = 1e-75 Identities = 204/229 (89%), Gaps = 5/229 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| |||| ||||||| |||||||||||||||| | Sbjct 346 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGAATT-C 289 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||| ||||| |||||||||| ||||| | | ||||| |||||| Sbjct 288 CTCGTTGAAGAGCAATAATTACAATGCTCTATCCCCAGCACGACGGAGTTTCACAAGATT 229 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 ||| ||||| ||||||||||| |||||||| || | | ||||||||||||||||||| Sbjct 228 ACCAAGACCTCTCGGCCAAGGT--TAGACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCG 171 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 ||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 170 GCCCAGAACGTCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 122 >seq32 Length=7780 Score = 264 bits (292), Expect = 2e-68 Identities = 199/229 (87%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||| ||| |||| ||||||| |||||||||||||||| | Sbjct 427 GTACAAAGGGCAGGGACGTAATCAGCGCAAGCT-GATGACTTGCGCTTACTAGGAATT-C 484 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||| ||||| | ||| | |||||| Sbjct 485 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACAGAGTTTAACAAGATT 544 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| || || ||| ||||| | | |||||||| | ||||||||||||||||||| Sbjct 545 ACCCAGATCTTTCGAACAAGGA-AGATACTCGTTGGCTCTGTCAGTGTAGCGCGCGTGCG 603 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 604 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 652 >seq5878 Length=3816 Score = 250 bits (276), Expect = 4e-64 Identities = 195/229 (85%), Gaps = 3/229 (1%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| || | |||||| ||||||||| || ||||||| ||| | Sbjct 2785 GTACAAAGGGCAGGGACGTAATCGGCACGAGCT-GATGACTCGTGCCTACTAGGCATT-C 2842 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||| ||||| ||| | |||||| Sbjct 2843 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACAGGGTTTAACAAGATT 2902 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| ||||| |||||||||||||| ||||| || ||||||||||||||||||| Sbjct 2903 ACCCAGACCTCTCGGCCAAGGTGATGTACTCGCTGGCCCTGTCAGTGTAGCGCGCGTGCG 2962 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 ||||||||||||||||||||||||||||||||||||||| | |||||| Sbjct 2963 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCGCGCACTTCC 3011 >seq5713 Length=5555 Score = 127 bits (140), Expect = 3e-27 Identities = 169/226 (75%), Gaps = 14/226 (6%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||| ||||||||||||| ||||||| |||| ||||||| | |||| ||||||| | Sbjct 2280 GTACAAGGGGCAGGGACGTATTCAACGCAAGCTA-ATGACTCACATTTACAAGGAATT-C 2223 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCC-ATCACGATGAAATTTCAAAGATT 119 |||||| | || | | ||| ||| | || ||||| | | | |||||| |||||||| Sbjct 2222 CTCGTTCATGAACTAAGATTACAAAGCTCAATCCCAGAGGAGAAAGAAATT-CAAAGATT 2164 Query 120 ACCCGGA-CCTGTCGGCCAAGG----TGATAGA----CTCGTTGAATACATCAGTGTAGC 170 |||| | ||| |||| ||| | ||| | ||||||| | ||| |||||| Sbjct 2163 ACCCATAACCTTTCGGTATAGGACATTAATAAATTAACTCGTTGTCTCTTTCAATGTAGC 2104 Query 171 GCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 216 ||||||||||||| | ||| |||||||| ||||||||||||||| Sbjct 2103 TCGCGTGCGGCCCAAGATATCAAAGGGCAT-ACAGACCTGTTATTG 2059 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751956763525