Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798715.1_202014-12-08] 5,935 sequences; 52,505,057 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq32 352 5e-95 seq5878 297 3e-78 seq5931 242 6e-62 seq5713 100 5e-19 >seq32 Length=7780 Score = 352 bits (390), Expect = 5e-95 Identities = 236/259 (91%), Gaps = 3/259 (1%) Strand=Plus/Plus Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 570 TACTCGTTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 629 Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120 ||||||||||||||||||||||||| | || | ||| ||||||||||||||||||| || Sbjct 630 ACCTGTTATTGCCTCAAACTTCCATCGACTTGC-GCCGATAGTCCCTCTAAGAAGCCGGC 688 Query 121 CACCAACCATAGTCGATGG-GGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179 |||| || ||| | | ||||||||||||||||||||||||||||||||||| |||| Sbjct 689 GACCAGCC-TAGGCTAGCCTGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGCAATT 747 Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239 || ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct 748 AAGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAAG 807 Query 240 AAAGAGCTATCAATCTGTC 258 |||||||| |||||||||| Sbjct 808 AAAGAGCTCTCAATCTGTC 826 >seq5878 Length=3816 Score = 297 bits (328), Expect = 3e-78 Identities = 222/258 (86%), Gaps = 2/258 (1%) Strand=Plus/Plus Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 |||||| |||| | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2929 TACTCGCTGGCCCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 2988 Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120 ||||||||||||| | |||||||| |||| || ||| |||||||| ||||||||||||| Sbjct 2989 ACCTGTTATTGCCGCGCACTTCCATCGGCTTGA-GCCGATAGTCCCCCTAAGAAGCCAGC 3047 Query 121 CACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180 || | | || |||||||||| || |||||||||||||||||| ||||| Sbjct 3048 GGCCCGCAGATGCGGACCGGGCTATTTAAG-GGCCGAGGTCTCGTTCGTTATCGCAATTA 3106 Query 181 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 240 | ||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||| Sbjct 3107 AGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCATCCAAAAGATCAAGA 3166 Query 241 AAGAGCTATCAATCTGTC 258 ||||||| |||||||||| Sbjct 3167 AAGAGCTCTCAATCTGTC 3184 >seq5931 Length=704 Score = 242 bits (268), Expect = 6e-62 Identities = 179/206 (87%), Gaps = 6/206 (3%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 203 ACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAGA 144 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAA---GCCA 118 |||||||||||||||||||||||| |||| ||| || |||||||||||||||| | | Sbjct 143 CCTGTTATTGCCTCAAACTTCCATCGGCTTGAAACCGATAGTCCCTCTAAGAAGTGGATA 84 Query 119 GCCACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAAT 178 ||| ||| || | | |||||||| |||||||||||||||||||||||| ||| Sbjct 83 ACCAGCAA--ATGCTAG-CACCACTATTTAGTAGGTTAAGGTCTCGTTCGTTATCGCAAT 27 Query 179 TAACCAGACAAATCACTCCACCAACT 204 ||| |||||||||||||||||||||| Sbjct 26 TAAGCAGACAAATCACTCCACCAACT 1 >seq5713 Length=5555 Score = 100 bits (110), Expect = 5e-19 Identities = 84/102 (82%), Gaps = 1/102 (1%) Strand=Plus/Minus Query 143 TATTTAGCAGGTTAAGGTCTCGTTCGTTA-TCGGAATTAACCAGACAAATCACTCCACCA 201 || |||||||| || |||| ||||||| ||||||| |||| |||||||||| |||| | Sbjct 1950 TAATTAGCAGGCTAGAGTCTTGTTCGTTTGTCGGAATCAACCTGACAAATCACCCCACGA 1891 Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAG 243 ||||| |||||||||||||||| | || ||||||||||| Sbjct 1890 ACTAATAACGGCCATGCACCACTATTCACTAAATCAAGAAAG 1849 Score = 73.4 bits (80), Expect = 6e-11 Identities = 59/70 (84%), Gaps = 1/70 (1%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || ||| ||| |||||| ||||||||||||| | ||| |||||||| ||||| Sbjct 2127 ACTCGTTGTCTCTTTCAATGTAGCTCGCGTGCGGCCCAAGATATCAAAGGGCAT-ACAGA 2069 Query 62 CCTGTTATTG 71 |||||||||| Sbjct 2068 CCTGTTATTG 2059 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796754187735