Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798715.1_202014-12-08] 5,935 sequences; 52,505,057 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq5931 100 2e-19 seq32 100 2e-19 seq5878 87.8 1e-15 seq5713 84.2 1e-14 >seq5931 Length=704 Score = 100 bits (110), Expect = 2e-19 Identities = 70/76 (92%), Gaps = 3/76 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||||||||| || |||||| || ||||||||||| |||||||||||||||||||| Sbjct 386 CTCACTAAGCCATT-CAATCGGTACTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACG 329 Query 109 TAATACAACGCAAGCT 124 |||| ||||||||||| Sbjct 328 TAAT-CAACGCAAGCT 314 >seq32 Length=7780 Score = 100 bits (110), Expect = 2e-19 Identities = 77/86 (90%), Gaps = 4/86 (5%) Strand=Plus/Plus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||||| |||||| ||||||| || ||||||||| ||||||||||| |||||||||| Sbjct 378 TCCGAAAGC-CTCACTTAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 434 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 |||||||||||||| || |||||||| Sbjct 435 GGCAGGGACGTAAT-CAGCGCAAGCT 459 >seq5878 Length=3816 Score = 87.8 bits (96), Expect = 1e-15 Identities = 66/74 (89%), Gaps = 3/74 (4%) Strand=Plus/Plus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | |||||| ||||||| || ||||||||| ||||||||||| |||||||||| Sbjct 2736 TCCGAAGGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 2792 Query 99 GGCAGGGACGTAAT 112 |||||||||||||| Sbjct 2793 GGCAGGGACGTAAT 2806 >seq5713 Length=5555 Score = 84.2 bits (92), Expect = 1e-14 Identities = 69/79 (87%), Gaps = 4/79 (5%) Strand=Plus/Minus Query 46 GTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGG 105 ||||| |||||| | ||||| |||||||| ||||||||||| |||||||| |||||||| Sbjct 2322 GTTCTTGCTAAGC-ACTTCAT-CGGTAGTA-GCGACGGGCGGTGTGTACAAGGGGCAGGG 2266 Query 106 ACGTAATACAACGCAAGCT 124 |||| || ||||||||||| Sbjct 2265 ACGT-ATTCAACGCAAGCT 2248 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300783263300