Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798715.1_202014-12-08] 5,935 sequences; 52,505,057 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq32 181 1e-43 seq5878 178 2e-42 >seq32 Length=7780 Score = 181 bits (200), Expect = 1e-43 Identities = 158/191 (83%), Gaps = 4/191 (2%) Strand=Plus/Plus Query 8 AGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGG 67 ||||||||||||||||| | |||||||||||||||||||||||||||||||||||| | Sbjct 1220 AGAAACCAACAAAATAGAACCACACGTCCTATTCTATTATTCCATGCTAATGTATTCGAG 1279 Query 68 CGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCACA 127 | || |||||||||||||||||||||||| |||| ||||||||||||||||| | |||| Sbjct 1280 CATAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTGGTTCCCCGACACA 1339 Query 128 -CCAATGAA-GGCATACGGGCTCACCAAGAGG-TAGGGCTGGGTAATGCAGTACTCGCCG 184 ||| |||| ||||| | ||||| ||| |||| || | || |||| | ||| | Sbjct 1340 CCCAGTGAAGGGCATGC-GGCTCCCCAGGAGGAAAGACCCGGCCGGACCAGTGCACGCGG 1398 Query 185 TGAGGCGGACC 195 ||||||||||| Sbjct 1399 TGAGGCGGACC 1409 >seq5878 Length=3816 Score = 178 bits (196), Expect = 2e-42 Identities = 157/192 (82%), Gaps = 3/192 (2%) Strand=Plus/Plus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 3579 CTAGAAACCAACAAAATAGAACCGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 3638 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125 || | |||||||||||||||||||||||| ||| ||||||||||||||||| || || Sbjct 3639 AGCAAAGGCCTGCTTTGAACACTCTAATTTTTTCACAGTAAAAGTCCTGGTTCC-CCCCA 3697 Query 126 CA-CCAATGAAGGCATACGGGCTCACCAAGAGG-TAGGGCTGGGTAATGCAGTACTCGCC 183 || ||| ||||||| || || ||| ||| ||| | | |||||||||| Sbjct 3698 CAGCCAGTGAAGGCCATGAGGTTCCCCAGAAGGAAAGGCCCAGCCGGACCAGTACTCGCG 3757 Query 184 GTGAGGCGGACC 195 |||||||||||| Sbjct 3758 GTGAGGCGGACC 3769 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595165778790