Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798715.1_202014-12-08] 5,935 sequences; 52,505,057 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq32 453 2e-125 seq5878 416 5e-114 seq5931 390 2e-106 seq5713 141 2e-31 >seq32 Length=7780 Score = 453 bits (502), Expect = 2e-125 Identities = 288/310 (93%), Gaps = 3/310 (1%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || ||||||||||||||||||||||||||||| || | ||| ||||||||||||||||| Sbjct 735 GAACGAGACCTTAACCTGCTAAATAGCCAGGCTAGCCTAGGCTGGTCGCCGGCTTCTTAG 676 Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 139 ||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 675 AGGGACTATCGGCGCAAGTCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 616 Query 140 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATC-ACCTTGGCC 198 ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| | Sbjct 615 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGT--ATCTTCCTTGTTC 558 Query 199 GGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 258 | ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 557 GAAAGATCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 498 Query 259 GCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCT 318 ||||||||||||||||| |||||||||||| ||||||||| ||| ||||||||||||| Sbjct 497 GCTCTTCAACGAGGAATTCCTAGTAAGCGCAAGTCATCAGCTTGCGCTGATTACGTCCCT 438 Query 319 GCCCTTTGTA 328 |||||||||| Sbjct 437 GCCCTTTGTA 428 >seq5878 Length=3816 Score = 416 bits (460), Expect = 5e-114 Identities = 266/290 (92%), Gaps = 0/290 (0%) Strand=Plus/Minus Query 39 TAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAGAGGGACTATCGGCTCAAGC 98 ||||||||| || |||| | ||||| ||| |||||||||| |||||||||||||||||| Sbjct 3075 TAAATAGCCCGGTCCGCATCTGCGGGCCGCTGGCTTCTTAGGGGGACTATCGGCTCAAGC 3016 Query 99 CGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGC 158 |||||||||| | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3015 CGATGGAAGTGCGCGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGC 2956 Query 159 GCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTG 218 ||||||||||||||| |||| ||||| |||||||||||||| ||||||||||||||||| Sbjct 2955 GCGCTACACTGACAGGGCCAGCGAGTACATCACCTTGGCCGAGAGGTCTGGGTAATCTTG 2896 Query 219 TTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCC 278 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2895 TTAAACCCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCC 2836 Query 279 TAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 ||||| || || ||||||||| || | |||||||||||||||||||||| Sbjct 2835 TAGTAGGCACGAGTCATCAGCTCGTGCCGATTACGTCCCTGCCCTTTGTA 2786 >seq5931 Length=704 Score = 390 bits (432), Expect = 2e-106 Identities = 274/310 (88%), Gaps = 3/310 (1%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || |||||||||||||| |||||||| || || || || ||| | |||||||| Sbjct 38 GAACGAGACCTTAACCTACTAAATAGTGGTGCTAGCATTTGCTGGTTATCCACTTCTTAG 97 Query 80 AGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 138 |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 98 AGGGACTATCGGTTTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 157 Query 139 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCC 198 ||| ||||||||||||||||||||||||||||| |||||| ||||| | ||||||||| Sbjct 158 AGACGTTCTGGGCCGCACGCGCGCTACACTGACGGAGCCAGCGAGTCTA--ACCTTGGCC 215 Query 199 GGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 258 | |||||| ||||||||||| |||||| ||||||||||||||||||||||| ||||||| Sbjct 216 GAGAGGTCTTGGTAATCTTGTGAAACTCCGTCGTGCTGGGGATAGAGCATTGTAATTATT 275 Query 259 GCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCT 318 ||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||| Sbjct 276 GCTCTTCAACGAGGAATTCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCCCT 335 Query 319 GCCCTTTGTA 328 |||||||||| Sbjct 336 GCCCTTTGTA 345 >seq5713 Length=5555 Score = 141 bits (156), Expect = 2e-31 Identities = 169/224 (75%), Gaps = 13/224 (6%) Strand=Plus/Plus Query 115 CAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGA 174 ||||||||||||||| |||||||| ||| | ||||||||||||| |||||| ||| ||| Sbjct 2059 CAATAACAGGTCTGT-ATGCCCTTTGATATCTTGGGCCGCACGCGAGCTACATTGAAAGA 2117 Query 175 GCCAACGAGTTCATCA--------CCTTGGCCGGAAGGTC-TGGGTAATCTTGTTAAACT 225 | ||||||||| || ||| ||| ||||| ||||||||||| | || | Sbjct 2118 GACAACGAGTTAATTTATTAATGTCCTATACCGAAAGGTTATGGGTAATCTT-TGAATTT 2176 Query 226 CTGTCGTGCTG-GGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAA 284 || || | || ||||| |||| ||| ||| | | || | |||||||||| ||| |||| Sbjct 2177 CTTTC-TCCTCTGGGATTGAGCTTTGTAATCTTAGTTCATGAACGAGGAATTCCTTGTAA 2235 Query 285 GCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 | | ||||| ||| ||||||| ||||||||||||| ||||| Sbjct 2236 ATGTGAGTCATTAGCTTGCGTTGAATACGTCCCTGCCCCTTGTA 2279 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947143783680