Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798715.1_202014-12-08] 5,935 sequences; 52,505,057 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq32 812 0.0 seq4486 452 1e-124 seq5918 309 1e-81 seq70 288 3e-75 seq5713 194 5e-47 seq104 111 5e-22 >seq32 Length=7780 Score = 812 bits (900), Expect = 0.0 Identities = 505/538 (94%), Gaps = 5/538 (1%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4800 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 4859 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 4860 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGATC 4919 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186 |||||||||||||||||| || |||| ||| | |||| |||||||||||||||||| Sbjct 4920 AGCCCGCGAAGGACCTTAATGCTAGAAGTTGGGCTGTGACACCCAGTTCCGCTTCATTGA 4979 Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246 ||||||||||||| |||| ||||||||||||||||| |||| || |||||||| || Sbjct 4980 ATAAGTAAAAAAACAATAAAGGTAGTGGTATTTCACTGGCGCTGAC---GCTCCCACCTA 5036 Query 247 TTCTACACCTCTCAA-GTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTT 305 | ||||||| ||| | ||| |||||||| ||| |||||||||||||||||||||||||| Sbjct 5037 TCCTACACC-CTCTATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTCTT 5095 Query 306 CTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGAT 365 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 5096 CTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGAT 5155 Query 366 AGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCAT 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5156 AGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCAT 5215 Query 426 TTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTC 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5216 TTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTC 5275 Query 486 TTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 5276 TTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACACCACTTTCTG 5333 >seq4486 Length=1541 Score = 452 bits (500), Expect = 1e-124 Identities = 289/314 (92%), Gaps = 3/314 (1%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct 311 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTGTT 252 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 251 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGATC 192 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186 ||||||||||||||||||||||||||| |||| |||||||| |||||||||||||||||| Sbjct 191 GGCCCGCGAAGGACCTTAACGCCAGAAGATGGGCGGTGAAGCCCAGTTCCGCTTCATTGA 132 Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246 |||||||||||||||||| ||||||||||||||||| |||||| | |||||||| || Sbjct 131 ATAAGTAAAAAAACGATAAAGGTAGTGGTATTTCACTGGCGCCGGA---GCTCCCACCTA 75 Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTC 306 | ||||||| | | ||| |||||||| ||| ||||||||||||||||||||||||||| Sbjct 74 TGCTACACCCCATATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTCTTC 15 Query 307 TTTCCCCGCTGATT 320 |||||||||||||| Sbjct 14 TTTCCCCGCTGATT 1 >seq5918 Length=1321 Score = 309 bits (342), Expect = 1e-81 Identities = 186/196 (95%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 268 TCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAA 327 |||||| | | ||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 196 TCACAATGCCAGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATCTCGCCAA 137 Query 328 GCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTA 387 ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| Sbjct 136 GCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAAGTAGGGACAGATGGAATCTCGTTA 77 Query 388 ATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCAT 447 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 76 ATCCATTCATGCACGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCAT 17 Query 448 AGTTACTCCCGCCGTT 463 |||||||||||||||| Sbjct 16 AGTTACTCCCGCCGTT 1 Score = 86.0 bits (94), Expect = 2e-14 Identities = 79/100 (79%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 14 TCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGGTTTAAC 73 ||||| |||||||||| |||| |||| | ||||||||||| ||||| ||| | Sbjct 525 TCTACGTGAGATTTCTGGTCTCACTGAGCTAACATTAGGACACCTACGTTAGCATTTGAT 466 Query 74 AGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113 |||||| ||||||||| |||||||||| |||| || |||| Sbjct 465 AGATGTACCGCCCCAGTCAAACTCCCCGCCTGGCACTGTC 426 >seq70 Length=12654 Score = 288 bits (318), Expect = 3e-75 Identities = 233/279 (84%), Gaps = 5/279 (2%) Strand=Plus/Plus Query 81 CCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATCGGCCCGCGAAGGAC 140 ||| || ||| ||||||||||||||||||||| |||||||||||| |||||| |||||| Sbjct 1202 CCGTCCTAGCATAACTCCCCACCTGACAATGTCCTCAACCCGGATCAGCCCGCAAAGGAC 1261 Query 141 CTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGATTAAGTaaaaaaaC 200 ||||| ||||||| | | | |||| | ||||||||||||||| ||||| |||||| Sbjct 1262 CTTAATGCCAGAAGTTTGGCCGTGACACTCGGTTCCGCTTCATTGAATAAGT-CAAAAAC 1320 Query 201 GATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTATTCTACACCTCTCA 260 |||| ||||||||||||||||| |||| || |||||||| ||||||||||| || Sbjct 1321 CATAAAGGTAGTGGTATTTCACTGGCGCTGA---CGCTCCCACCTATTCTACACCCTGCA 1377 Query 261 AGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATT 320 ||| ||||| | || |||||||||||||||||||||||| ||||||||||||| | Sbjct 1378 TGTCTTTTCA-TTATACGAACTAGAGTCAAGCTCAACAGGGTCGTCTTTCCCCGCTGGTA 1436 Query 321 CCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATA 359 | ||||||||||||||||||||||| ||||||||||||| Sbjct 1437 CTGCCAAGCCCGTTCCCTTGGCTGTAGTTTCGCTAGATA 1475 >seq5713 Length=5555 Score = 194 bits (214), Expect = 5e-47 Identities = 116/122 (95%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 412 AGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCG 471 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5555 AGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCG 5496 Query 472 CTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAA 531 ||| |||||||||| ||| ||||||||||||||||||||||||| |||||||| ||||| Sbjct 5495 CTTCATTGAATTTCTACACGTTGACATTCAGAGCACTGGGCAGAATTCACATTGAGTCAA 5436 Query 532 CA 533 || Sbjct 5435 CA 5434 >seq104 Length=40387 Score = 111 bits (122), Expect = 5e-22 Identities = 67/71 (94%), Gaps = 0/71 (0%) Strand=Plus/Minus Query 326 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 385 ||||| | ||||||||||||||||||| |||||||||||||||||||||||||| ||||| Sbjct 19717 AAGCCTGCTCCCTTGGCTGTGGTTTCGTTAGATAGTAGATAGGGACAGTGGGAACCTCGT 19658 Query 386 TAATCCATTCA 396 ||||||||||| Sbjct 19657 TAATCCATTCA 19647 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635102950880