Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798715.1_202014-12-08] 5,935 sequences; 52,505,057 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq4486 291 1e-76 seq32 288 2e-75 >seq4486 Length=1541 Score = 291 bits (322), Expect = 1e-76 Identities = 239/282 (85%), Gaps = 8/282 (3%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||||| ||||||||||||||||||||||||||||||||| Sbjct 618 GTACGAGAGGAACCGTTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 675 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||| |||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct 676 GCCGCGACGCTACCATCTGCCGGATTATGGCTGAACGCCTCTAAGTCAGAATCCGTGCCG 735 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTC--GGCCCCGA 178 ||||| || |||| || |||| ||||||| |||||||||||||| || |||| || Sbjct 736 GAACGCGGCGATTTCGCCCCGCACGTCGTAGTTGGATACGAATAGGCCTCCGGGCCACGC 795 Query 179 ACCTTAGCAGGCCGGCAACGGGCGTCCCGCG-GAAGCGC-GGGGCGCTCAGCTGGCGGAT 236 |||| ||||||| ||| || |||| || | | ||| | | ||| ||| |||||||||| Sbjct 796 ACCTCAGCAGGCTGGCGAC-GGCGCCCGGGGAGAAACCCTCGGGGGCT-GGCTGGCGGAT 853 Query 237 TGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 |||||| ||||| |||| |||||| ||||| |||||||||| Sbjct 854 TGCAATGTCACCTCGCGCGGGGATAGATCCTCTGCAGACGAC 895 >seq32 Length=7780 Score = 288 bits (318), Expect = 2e-75 Identities = 236/281 (84%), Gaps = 7/281 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| || |||||| ||||||||||| ||||||||||||||||||||| Sbjct 4476 GTACGAGAGGAACCGCTGA-TTCAGA-TAATTGGTTTTGGCGGCTGTCTGACCAGGCAGT 4419 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 4418 GCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 4359 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGG---CTTCGGCCCCG 177 ||| | || || | |||| ||||||||||||||||||||||||| || ||||| | Sbjct 4358 GAAAGCGGCGAGTACCTCCCACACATCGTAGTCGGATACGAATAGGCCCCTAGGGCCCTG 4299 Query 178 AACCTTAGCAGGCCGGCAACGGGCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGATT 237 || ||||||||| ||||| || || | ||| | ||| ||| ||||| || || Sbjct 4298 AATCTTAGCAGGTCGGCATTGGTGCTCGGGGAGAAATCCTGGGTGCT-AGCTGACGTCTT 4240 Query 238 GCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 ||||||| | |||||| |||||||| |||||||| ||||| Sbjct 4239 GCAATTT-AACATGCGTGGGGATAAAACCTTTGCATACGAC 4200 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819152899840