Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798715.1_202014-12-08] 5,935 sequences; 52,505,057 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq32 832 0.0 seq5870 715 0.0 seq5713 196 1e-47 >seq32 Length=7780 Score = 832 bits (922), Expect = 0.0 Identities = 487/504 (97%), Gaps = 0/504 (0%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 1545 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGCATCAGTATTTATTGTCACTACCT 1604 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1605 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 1664 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| Sbjct 1665 TCTCAGGCTCCCTCTCCGGAATAGAACCCTAATTCCCCGTTACCCGTTGAAACCATGGTA 1724 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 | || ||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1725 GTCCCATATACTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCA 1784 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 |||||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||| Sbjct 1785 CAAGGCCATGCGATTCGTTAAGTTATCATGAATCACCAAAGAGCCCCGAAGGGCATTGGT 1844 Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360 |||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 1845 TTTTAATCTAATAAATACACCCCTTCCGAAGTCGGGGCTTTTAGCATGTATTAGCTCTAG 1904 Query 361 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 420 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 1905 AATTACCACGGTTATCCAAGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 1964 Query 421 GCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 480 ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| Sbjct 1965 GCCATTCGCAGTTTCACGGTATAATTTGCTTATACTTAGACATGCATGGCTTAATCTTTG 2024 Query 481 AGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||| Sbjct 2025 AGACAAGCATATGACTACTGGCAG 2048 >seq5870 Length=1213 Score = 715 bits (792), Expect = 0.0 Identities = 415/426 (97%), Gaps = 1/426 (0%) Strand=Plus/Plus Query 80 AATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGG 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 AATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGG 60 Query 140 AATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCTACCATCG 199 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 61 AATCGAACCCTAATTCCCCGTTACCCGTTGCCACCATGGTAGGCCACTATCCTACCATCG 120 Query 200 AAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCAAGGCCATGCGATTCGTT 259 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 121 AAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCGCAAGGCCATGCGATTCGTT 180 Query 260 AAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGTTTTTTATCTAATAAATACA 319 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 181 AAGTTATTATGATTCACCAAGGAGCCCCGAAGGGCGTTGGTTTTTTATCTAATAAATACA 240 Query 320 CCCCTTCC-GAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCA 378 |||||||| ||||||||||||| |||||||||||||||||||||||||||| | |||||| Sbjct 241 CCCCTTCCTGAAGTCGGGGTTTGTAGCATGTATTAGCTCTAGAATTACCACAGGTATCCA 300 Query 379 TGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACT 438 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 301 TGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACA 360 Query 439 GTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTAC 498 ||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 361 GTATAAAGTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTAC 420 Query 499 TGGCAG 504 |||||| Sbjct 421 TGGCAG 426 >seq5713 Length=5555 Score = 196 bits (216), Expect = 1e-47 Identities = 326/463 (70%), Gaps = 35/463 (8%) Strand=Plus/Minus Query 73 ATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCC 132 |||||| || |||||||||||||||| |||| ||||| |||||||||||||||||||| Sbjct 955 ATTGGGCAAATTGCGCGCCTGCTGCCACCCTTAGATGTAGTAGCCGTTTCTCAGGCTCCT 896 Query 133 TCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGAT-ACCATGGTAGGCCACTATCC 191 |||||||||| |||||| |||||||||||| || |||| ||| |||||| || | | Sbjct 895 TCTCCGGAATAGAACCCATATTCCCCGTTACTCG-TGATCACCTTGGTAGTCCCGTCGAC 837 Query 192 TACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCG--GCTC----AAGG 245 ||||| | |||||||||| ||||||| ||||| | | || ||| |||| ||| Sbjct 836 TACCAACAAAAGTTGATAAGGCAGAAGCCTGAATTACACTTCACCGTCGCTCCGAAGAGG 777 Query 246 CC----ATGCGATTCGTTAAGTTATTATGAATCACC----AAG---GAGCCCCGA--AGG 292 | ||| | | | ||||| || ||||| ||| ||| || | | Sbjct 776 ACTTAAATGATAGCTGAAATGTTATCTAGATTCACCTCTGAAGTGAAAGCACCAATCCGA 717 Query 293 GCGTTGGTTTTTTA---------TCTAATAAATACACCCCTT--CCGAAGTCGGGGTTTT 341 | ||| | | || ||||||||| | | || ||||| | | Sbjct 716 GAATTGATACTCTACAATCTGGGTCTAATAAA-ATGCGATTTGCCCGAAAACAAACCTGA 658 Query 342 TAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAA 401 |||||||||||||||||| ||||||| ||||||||| ||| || | ||| || Sbjct 657 ATGCATGTATTAGCTCTAGATTTACCACAGTTATCCATTTAGGAACTCGAGAGCAAGGAA 598 Query 402 ACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGAC 461 |||||||||||||||||| || || |||||||| ||| || | | |||| |||| Sbjct 597 GTTATAACTGATTTAATGAGCTGTTTGCGGTTTCACTTTATCGA--GGCTGTACTGAGAC 540 Query 462 ATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||| ||| ||| ||||||||||| Sbjct 539 ATGCATGGCTTAATCTTTGAAGGTAGCGTATCACTACTGGCAG 497 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510310357760