Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798715.1_202014-12-08] 5,935 sequences; 52,505,057 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq643 242 3e-59 seq1878 129 5e-25 >seq643 Length=60608 Score = 242 bits (268), Expect = 3e-59 Identities = 621/937 (66%), Gaps = 10/937 (1%) Strand=Plus/Minus Query 66008 GCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCG 66067 || || ||||| | || || ||||| | || || |||| | || || ||||||||| Sbjct 38733 GCTAGGGATGCCAAATTACAAACAGCCACTTCATCCGGAGATGAGTATTCAACAATTTCG 38674 Query 66068 GTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCAT 66127 || || |||||| || || || || || | ||| | |||||| ||||| ||| ||| Sbjct 38673 GTACAAAGATTAGAGCTACGGATAGTCCCGAGATTTTTTTGATTGCTCTTTTTATTACAT 38614 Query 66128 GCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGC 66187 ||||| ||||| | ||| | || || || || || ||| | || || || | || | Sbjct 38613 GCATCTTTGTAGAGCATAAAAGGGGTACCAGTTTCTGTTTGTGCTTCGATTATTGAGTAC 38554 Query 66188 CAAAGAGCGCGTGCCTTCACCGTACGTACCGCCCTACCTTTGC-GTTCGTAATGTTCGTA 66246 || || ||||| | | || | ||| ||| | || || |||| || | ||| || Sbjct 38553 CATAGCTTTTGTGCCATAATAGTTC-TACGGCCTTTCCCTTCTTGTTCATACTTTTCATA 38495 Query 66247 GAGGTGTTCGAAGGATTCACC-CCATACT--TCGGACAGACATGGACACTTGTGTGGACA 66303 | || || |||| | |||||| || | |||| ||||| | || || Sbjct 38494 TAAAGCCTCAAA---TTCATCGCCATACACATCAGCTAGACCAGGACATTCACAAGGGCA 38438 Query 66304 CATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAG 66363 |||||| | ||| ||||||| | ||| || | |||||| |||||||||||||| || Sbjct 38437 CATCAGGGTCCATTCACCATTTTTTTCAACTCTCTTCATAAAGAGATCAGGTATCCAAAG 38378 Query 66364 GGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAG 66423 ||| ||||| ||||| ||||| || || || |||||||||||||||| | |||||| Sbjct 38377 GGCATAGAATAGATCACGTGCACGAACTTCTTCTTTGCCGTGATTTTTGCGGAGGTCGAG 38318 Query 66424 GAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTT 66483 ||||||||| || ||||| |||||||| |||| || || ||||| | ||| ||| || Sbjct 38317 GAACTCAAATATATCGGCGTGCCATGGCTCCAAATATATAGCGAATGCTCCCGGACGCTT 38258 Query 66484 GCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAG 66543 |||||||| || || || | || ||| |||||||| || | ||||||||| | Sbjct 38257 ATTACCACCTTGATCAACATATCTGGCAGTATTATTGAAGACTCGGAGCATCGGTACAAT 38198 Query 66544 CCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAAC 66603 || || || || ||||| || || |||| | ||| || || || |||| Sbjct 38197 ACCATTTGAGTTTCCATTTGTTCCTGCGATATAAGCACCTGTCGCGCGAATCCGATGAAT 38138 Query 66604 ATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAA 66663 ||| | |||||||||||||| | || || || ||| ||| || || | | Sbjct 38137 ATTTAAGCCAATACCACCGGCATTTTTAGAAATCATAGCGCAAGTTTTCAAAGTATCGTA 38078 Query 66664 TATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTT 66723 || || ||||| || | || || | | |||||||| ||||| | || Sbjct 38077 GATTCCATCAATACTATCCTCTTTCATATCAATTAAAAAGCATGAAGAGAGTTGAGATTG 38018 Query 66724 GGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTA 66783 || || |||| | || || || || | ||| ||||||||||| | ||||| Sbjct 38017 TGGAGTACCGGCTGCAAATAGAGTAGGGGAAGCATGCGTAAAGTATTTATTGGACATTAG 37958 Query 66784 ATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGC-ACATCGCA 66842 ||| || ||||| || ||| ||||||| || ||||| || | || ||| |||| Sbjct 37957 ATTATAAGTCTCTATAGCAGATTCAATGTCATCTTGGTGAATTCCAACAGCGACA-CGCA 37899 Query 66843 TCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTT 66902 | | | | ||| ||||| || || | ||| |||| | | | || || | || Sbjct 37898 TTATCATATGTTGTGGCCGCTCCACAATTTTATCATTGAGGCGAAGAAGATATGATCTTT 37839 Query 66903 CCAGGGTCTTGATACCAAAGTACGAGTAATTGAAATC 66939 |||| ||||||| ||||| ||| |||||| || || Sbjct 37838 CCAGAGTCTTGAAGCCAAAATACTGGTAATTAAAGTC 37802 >seq1878 Length=35555 Score = 129 bits (142), Expect = 5e-25 Identities = 305/458 (67%), Gaps = 7/458 (2%) Strand=Plus/Plus Query 61477 ACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCG 61536 |||||||| |||| | | || ||||| | || ||||| ||||||||||||| || Sbjct 22660 ACATTTGGACAACGTCTTGTAGCTTTTGCTGCAGTGGAGGGAATATTTTTCAGTGGTTCC 22719 Query 61537 TTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAAT 61596 ||||| | || ||||||||||||||||| || | ||| | || || ||||| || Sbjct 22720 TTTGCTTCCATTTTTTGGTTGAAGAAACGAGGGTTGATGGCTGGCCTAACCTTTTCTAAC 22779 Query 61597 GAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGC 61656 || | || ||||| ||||| ||| | || || |||||| | | || || || Sbjct 22780 GAACTTATTTCACGTGACGAAGGCCTACACACGGACTTTGCTTGTCTCCTCTTTTCAC-- 22837 Query 61657 TATCTGGTGAATCGTCCGTCGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACT 61716 || || | | | || || || || ||| || || | | || || Sbjct 22838 -ATTTGAAGCACAGACCATCTAAGCAGTCTGTTCAGGATGTTATCACACAAGCCGTCGAG 22896 Query 61717 ATCGAACAGGAATTTCTGACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGA 61776 || ||||| |||||||| ||||| || |||| | | || |||||||||| Sbjct 22897 ATAGAACAAGAATTTCTAACTGAAGCGCTGCCATGCGCTCTACTCGGCATGAACGCCACT 22956 Query 61777 CTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAG 61836 || ||| |||||| || ||||| ||||| || || || | || || || | | Sbjct 22957 CTGATGAAGCAGTACATCGAATTCGTTGCAGATCGACTTCTCCTCTCGTTAGGAA--ATT 23014 Query 61837 CGGATCTATAATACG--AAAAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCA 61894 | | |||| | | ||||| ||||||||||||||||| | || || ||| ||| | Sbjct 23015 CCAAAGTATACAAAGTCAAAAATCCATTTGATTTCATGGAAAATATCTCTTTGGCTGGGA 23074 Query 61895 AGACGAATTTTTTCGAGAAACGTGTAGGCGACTATCAA 61932 |||| || |||||||| ||||| ||||| ||||||||| Sbjct 23075 AGACTAACTTTTTCGAAAAACGAGTAGGTGACTATCAA 23112 Score = 82.4 bits (90), Expect = 6e-11 Identities = 195/289 (67%), Gaps = 7/289 (2%) Strand=Plus/Plus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| ||||||||||| || || || || || ||||| | |||||| | |||||| Sbjct 22219 ATATGGCATATGTACAAAAAAGCCGAGGCATCTTTTTGGACTGCTGAGGAGATTGATTTG 22278 Query 61147 TCCAAAGACATGAATGACTGG---GAGCGT-TTATCGAGCGGTGAACAACATTTCATTAA 61202 || ||||| || | || ||| | ||| | | || | ||||| | | || || Sbjct 22279 TCTAAAGATATCCACGATTGGAATAACCGTCTCAATGA-TGATGAACGATACTTTATATC 22337 Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262 |||||| | || || |||||||| || ||||| || || ||||| || | | || || Sbjct 22338 TCATGTGCTAGCCTTTTTTGCCGCCTCAGACGGGATTGTTAATGAAAACCTCGTCGAGCG 22397 Query 61263 TTTCGCGCAG-GAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCA 61321 || |||| || ||||| | | ||||| | | || || || || || ||| | Sbjct 22398 GTT-TAGCAGTGAAGTGCAGATTCCTGAGGCTAGATTCTTTTATGGATTTCAAATTATGA 22456 Query 61322 TGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACAT 61370 |||| ||| ||||||| || | || || | |||||||| ||||| Sbjct 22457 TGGAAAATATCCACTCTGAAACTTATTCGCTTTTAATCGATACTTACAT 22505 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397539242788400