Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798735.1_202014-12-08] 6,224 sequences; 50,658,153 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq125 242 3e-59 seq3947 129 5e-25 >seq125 Length=45052 Score = 242 bits (268), Expect = 3e-59 Identities = 621/937 (66%), Gaps = 10/937 (1%) Strand=Plus/Minus Query 66008 GCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCG 66067 || || ||||| | || || ||||| | || || |||| | || || ||||||||| Sbjct 27876 GCTAGGGATGCCAAATTACAAACAGCCACTTCATCCGGAGATGAGTATTCAACAATTTCG 27817 Query 66068 GTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCAT 66127 || || |||||| || || || || || | ||| | |||||| ||||| ||| ||| Sbjct 27816 GTACAAAGATTAGAGCTACGGATAGTCCCGAGATTTTTTTGATTGCTCTTTTTATTACAT 27757 Query 66128 GCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGC 66187 ||||| ||||| | ||| | || || || || || ||| | || || || | || | Sbjct 27756 GCATCTTTGTAGAGCATAAAAGGGGTACCAGTTTCTGTTTGTGCTTCGATTATTGAGTAC 27697 Query 66188 CAAAGAGCGCGTGCCTTCACCGTACGTACCGCCCTACCTTTGC-GTTCGTAATGTTCGTA 66246 || || ||||| | | || | ||| ||| | || || |||| || | ||| || Sbjct 27696 CATAGCTTTTGTGCCATAATAGTTC-TACGGCCTTTCCCTTCTTGTTCATACTTTTCATA 27638 Query 66247 GAGGTGTTCGAAGGATTCACC-CCATACT--TCGGACAGACATGGACACTTGTGTGGACA 66303 | || || |||| | |||||| || | |||| ||||| | || || Sbjct 27637 TAAAGCCTCAAA---TTCATCGCCATACACATCAGCTAGACCAGGACATTCACAAGGGCA 27581 Query 66304 CATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAG 66363 |||||| | ||| ||||||| | ||| || | |||||| |||||||||||||| || Sbjct 27580 CATCAGAGTCCATTCACCATTTTTTTCAACTCTCTTCATAAAGAGATCAGGTATCCAAAG 27521 Query 66364 GGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAG 66423 ||| ||||| ||||| ||||| || || || |||||||||||||||| | |||||| Sbjct 27520 GGCATAGAATAGATCACGTGCACGAACTTCTTCTTTGCCGTGATTTTTGCGGAGGTCGAG 27461 Query 66424 GAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTT 66483 ||||||||| || ||||| |||||||| |||| || || ||||| | ||| ||| || Sbjct 27460 GAACTCAAATATATCGGCGTGCCATGGCTCCAAATATATAGCGAATGCTCCCGGACGCTT 27401 Query 66484 GCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAG 66543 |||||||| || || || | || ||| |||||||| || | ||||||||| | Sbjct 27400 ATTACCACCTTGATCAACATATCTGGCAGTATTATTGAAGACTCGGAGCATCGGTACAAT 27341 Query 66544 CCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAAC 66603 || || || || ||||| || || |||| | ||| || || || |||| Sbjct 27340 ACCATTTGAGTTTCCATTTGTTCCTGCGATATAAGCACCTGTCGCGCGAATCCGATGAAT 27281 Query 66604 ATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAA 66663 ||| | |||||||||||||| | || || || ||| ||| || || | | Sbjct 27280 ATTTAAGCCAATACCACCGGCATTTTTAGAAATCATAGCGCAAGTTTTCAAAGTATCGTA 27221 Query 66664 TATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTT 66723 || || ||||| || | || || | | |||||||| ||||| | || Sbjct 27220 GATTCCATCAATACTATCCTCTTTCATATCAATTAAAAAGCATGAAGAGAGTTGAGATTG 27161 Query 66724 GGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTA 66783 || || |||| | || || || || | ||| ||||||||||| | ||||| Sbjct 27160 TGGAGTACCGGCTGCAAATAGAGTAGGGGAAGCATGCGTAAAGTATTTATTGGACATTAG 27101 Query 66784 ATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGC-ACATCGCA 66842 ||| || ||||| || ||| ||||||| || ||||| || | || ||| |||| Sbjct 27100 ATTATAAGTCTCTATAGCAGATTCAATGTCATCTTGGTGAATTCCAACAGCGACA-CGCA 27042 Query 66843 TCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTT 66902 | | | | ||| ||||| || || | ||| |||| | | | || || | || Sbjct 27041 TTATCATATGTTGTGGCCGCTCCACAATTTTATCATTGAGGCGAAGAAGATATGATCTTT 26982 Query 66903 CCAGGGTCTTGATACCAAAGTACGAGTAATTGAAATC 66939 |||| ||||||| ||||| ||| |||||| || || Sbjct 26981 CCAGAGTCTTGAAGCCAAAATACTGGTAATTAAAGTC 26945 >seq3947 Length=15482 Score = 129 bits (142), Expect = 5e-25 Identities = 305/458 (67%), Gaps = 7/458 (2%) Strand=Plus/Plus Query 61477 ACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCG 61536 |||||||| |||| | | || ||||| | || ||||| ||||||||||||| || Sbjct 8793 ACATTTGGACAACGTCTTGTAGCTTTTGCTGCAGTGGAGGGAATATTTTTCAGTGGTTCC 8852 Query 61537 TTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAAT 61596 ||||| | || ||||||||||||||||| || | ||| | || || ||||| || Sbjct 8853 TTTGCTTCCATTTTTTGGTTGAAGAAACGAGGGTTGATGGCTGGCCTAACCTTTTCTAAC 8912 Query 61597 GAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGC 61656 || | || ||||| ||||| ||| | || || |||||| | | || || || Sbjct 8913 GAACTTATTTCACGTGACGAAGGCCTACACACGGACTTTGCTTGTCTCCTCTTTTCAC-- 8970 Query 61657 TATCTGGTGAATCGTCCGTCGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACT 61716 || || | | | || || || || ||| || || | | || || Sbjct 8971 -ATTTGAAGCACAGACCATCTAAGCAGTCTGTTCAGGATGTTATCACACAAGCCGTCGAG 9029 Query 61717 ATCGAACAGGAATTTCTGACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGA 61776 || ||||| |||||||| ||||| || |||| | | || |||||||||| Sbjct 9030 ATAGAACAAGAATTTCTAACTGAAGCGCTGCCATGCGCTCTACTCGGCATGAACGCCACT 9089 Query 61777 CTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAG 61836 || ||| |||||| || ||||| ||||| || || || | || || || | | Sbjct 9090 CTGATGAAGCAGTACATCGAATTCGTTGCAGATCGACTTCTCCTCTCGTTAGGAA--ATT 9147 Query 61837 CGGATCTATAATACG--AAAAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCA 61894 | | |||| | | ||||| ||||||||||||||||| | || || ||| ||| | Sbjct 9148 CCAAAGTATACAAAGTCAAAAATCCATTTGATTTCATGGAAAATATCTCTTTGGCTGGGA 9207 Query 61895 AGACGAATTTTTTCGAGAAACGTGTAGGCGACTATCAA 61932 |||| || |||||||| ||||| ||||| ||||||||| Sbjct 9208 AGACTAACTTTTTCGAAAAACGAGTAGGTGACTATCAA 9245 Score = 82.4 bits (90), Expect = 6e-11 Identities = 195/289 (67%), Gaps = 7/289 (2%) Strand=Plus/Plus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| ||||||||||| || || || || || ||||| | |||||| | |||||| Sbjct 8352 ATATGGCATATGTACAAAAAAGCCGAGGCATCTTTTTGGACTGCTGAGGAGATTGATTTG 8411 Query 61147 TCCAAAGACATGAATGACTGG---GAGCGT-TTATCGAGCGGTGAACAACATTTCATTAA 61202 || ||||| || | || ||| | ||| | | || | ||||| | | || || Sbjct 8412 TCTAAAGATATTCACGATTGGAATAACCGTCTCAATGA-TGATGAACGATACTTTATATC 8470 Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262 |||||| | || || |||||||| || ||||| || || ||||| || | | || || Sbjct 8471 TCATGTGCTAGCCTTTTTTGCCGCCTCAGACGGGATTGTTAATGAAAACCTCGTCGAGCG 8530 Query 61263 TTTCGCGCAG-GAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCA 61321 || |||| || ||||| | | ||||| | | || || || || || ||| | Sbjct 8531 GTT-TAGCAGTGAAGTGCAGATTCCTGAGGCTAGATTCTTTTATGGATTTCAAATTATGA 8589 Query 61322 TGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACAT 61370 |||| ||| ||||||| || | || || | |||||||| ||||| Sbjct 8590 TGGAAAATATCCACTCTGAAACTTATTCGCTTTTAATCGATACTTACAT 8638 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397537842479360