Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798755.1_202014-12-08] 6,979 sequences; 49,465,130 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq1112 242 3e-59 seq2264 129 5e-25 >seq1112 Length=30899 Score = 242 bits (268), Expect = 3e-59 Identities = 621/937 (66%), Gaps = 10/937 (1%) Strand=Plus/Plus Query 66008 GCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCG 66067 || || ||||| | || || ||||| | || || |||| | || || ||||||||| Sbjct 17172 GCTAGGGATGCCAAATTACAAACAGCCACTTCATCCGGAGATGAGTATTCAACAATTTCG 17231 Query 66068 GTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCAT 66127 || || |||||| || || || || || | ||| | |||||| ||||| ||| ||| Sbjct 17232 GTACAAAGATTAGAGCTACGGATAGTCCCGAGATTTTTTTGATTGCTCTTTTTATTACAT 17291 Query 66128 GCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGC 66187 ||||| ||||| | ||| | || || || || || ||| | || || || | || | Sbjct 17292 GCATCTTTGTAGAGCATAAAAGGGGTACCAGTTTCTGTTTGTGCTTCGATTATTGAGTAC 17351 Query 66188 CAAAGAGCGCGTGCCTTCACCGTACGTACCGCCCTACCTTTGC-GTTCGTAATGTTCGTA 66246 || || ||||| | | || | ||| ||| | || || |||| || | ||| || Sbjct 17352 CATAGCTTTTGTGCCATAATAGTTC-TACGGCCTTTCCCTTCTTGTTCATACTTTTCATA 17410 Query 66247 GAGGTGTTCGAAGGATTCACC-CCATACT--TCGGACAGACATGGACACTTGTGTGGACA 66303 | || || |||| | |||||| || | |||| ||||| | || || Sbjct 17411 TAAAGCCTCAAA---TTCATCGCCATACACATCAGCTAGACCAGGACATTCACAAGGGCA 17467 Query 66304 CATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAG 66363 |||||| | ||| ||||||| | ||| || | |||||| |||||||||||||| || Sbjct 17468 CATCAGGGTCCATTCACCATTTTTTTCAACTCTCTTCATAAAGAGATCAGGTATCCAAAG 17527 Query 66364 GGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAG 66423 ||| ||||| ||||| ||||| || || || |||||||||||||||| | |||||| Sbjct 17528 GGCATAGAATAGATCACGTGCACGAACTTCTTCTTTGCCGTGATTTTTGCGGAGGTCGAG 17587 Query 66424 GAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTT 66483 ||||||||| || ||||| |||||||| |||| || || ||||| | ||| ||| || Sbjct 17588 GAACTCAAATATATCGGCGTGCCATGGCTCCAAATATATAGCGAATGCTCCCGGACGCTT 17647 Query 66484 GCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAG 66543 |||||||| || || || | || ||| |||||||| || | ||||||||| | Sbjct 17648 ATTACCACCTTGATCAACATATCTGGCAGTATTATTGAAGACTCGGAGCATCGGTACAAT 17707 Query 66544 CCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAAC 66603 || || || || ||||| || || |||| | ||| || || || |||| Sbjct 17708 ACCATTTGAGTTTCCATTTGTTCCTGCGATATAAGCACCTGTCGCGCGAATCCGATGAAT 17767 Query 66604 ATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAA 66663 ||| | |||||||||||||| | || || || ||| ||| || || | | Sbjct 17768 ATTTAAGCCAATACCACCGGCATTTTTAGAAATCATAGCGCAAGTTTTCAAAGTATCGTA 17827 Query 66664 TATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTT 66723 || || ||||| || | || || | | |||||||| ||||| | || Sbjct 17828 GATTCCATCAATACTATCCTCTTTCATATCAATTAAAAAGCATGAAGAGAGTTGAGATTG 17887 Query 66724 GGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTA 66783 || || |||| | || || || || | ||| ||||||||||| | ||||| Sbjct 17888 TGGAGTACCGGCTGCAAATAGAGTAGGGGAAGCATGCGTAAAGTATTTATTGGACATTAG 17947 Query 66784 ATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGC-ACATCGCA 66842 ||| || ||||| || ||| ||||||| || ||||| || | || ||| |||| Sbjct 17948 ATTATAAGTCTCTATAGCAGATTCAATGTCATCTTGGTGAATTCCAACAGCGACA-CGCA 18006 Query 66843 TCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTT 66902 | | | | ||| ||||| || || | ||| |||| | | | || || | || Sbjct 18007 TTATCATATGTTGTGGCCGCTCCACAATTTTATCATTGAGGCGAAGAAGATATGATCTTT 18066 Query 66903 CCAGGGTCTTGATACCAAAGTACGAGTAATTGAAATC 66939 |||| ||||||| ||||| ||| |||||| || || Sbjct 18067 CCAGAGTCTTGAAGCCAAAATACTGGTAATTAAAGTC 18103 >seq2264 Length=21137 Score = 129 bits (142), Expect = 5e-25 Identities = 305/458 (67%), Gaps = 7/458 (2%) Strand=Plus/Plus Query 61477 ACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCG 61536 |||||||| |||| | | || ||||| | || ||||| ||||||||||||| || Sbjct 8250 ACATTTGGACAACGTCTTGTAGCTTTTGCTGCAGTGGAGGGAATATTTTTCAGTGGTTCC 8309 Query 61537 TTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAAT 61596 ||||| | || ||||||||||||||||| || | ||| | || || ||||| || Sbjct 8310 TTTGCTTCCATTTTTTGGTTGAAGAAACGAGGGTTGATGGCTGGCCTAACCTTTTCTAAC 8369 Query 61597 GAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGC 61656 || | || ||||| ||||| ||| | || || |||||| | | || || || Sbjct 8370 GAACTTATTTCACGTGACGAAGGCCTACACACGGACTTTGCTTGTCTCCTCTTTTCAC-- 8427 Query 61657 TATCTGGTGAATCGTCCGTCGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACT 61716 || || | | | || || || || ||| || || | | || || Sbjct 8428 -ATTTGAAGCACAGACCATCTAAGCAGTCTGTTCAGGATGTTATCACACAAGCCGTCGAG 8486 Query 61717 ATCGAACAGGAATTTCTGACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGA 61776 || ||||| |||||||| ||||| || |||| | | || |||||||||| Sbjct 8487 ATAGAACAAGAATTTCTAACTGAAGCGCTGCCATGCGCTCTACTCGGCATGAACGCCACT 8546 Query 61777 CTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAG 61836 || ||| |||||| || ||||| ||||| || || || | || || || | | Sbjct 8547 CTGATGAAGCAGTACATCGAATTCGTTGCAGATCGACTTCTCCTCTCGTTAGGAA--ATT 8604 Query 61837 CGGATCTATAATACG--AAAAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCA 61894 | | |||| | | ||||| ||||||||||||||||| | || || ||| ||| | Sbjct 8605 CCAAAGTATACAAAGTCAAAAATCCATTTGATTTCATGGAAAATATCTCTTTGGCTGGGA 8664 Query 61895 AGACGAATTTTTTCGAGAAACGTGTAGGCGACTATCAA 61932 |||| || |||||||| ||||| ||||| ||||||||| Sbjct 8665 AGACTAACTTTTTCGAAAAACGAGTAGGTGACTATCAA 8702 Score = 82.4 bits (90), Expect = 6e-11 Identities = 195/289 (67%), Gaps = 7/289 (2%) Strand=Plus/Plus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| ||||||||||| || || || || || ||||| | |||||| | |||||| Sbjct 7809 ATATGGCATATGTACAAAAAAGCCGAGGCATCTTTTTGGACTGCTGAGGAGATTGATTTG 7868 Query 61147 TCCAAAGACATGAATGACTGG---GAGCGT-TTATCGAGCGGTGAACAACATTTCATTAA 61202 || ||||| || | || ||| | ||| | | || | ||||| | | || || Sbjct 7869 TCTAAAGATATCCACGATTGGAATAACCGTCTCAATGA-TGATGAACGATACTTTATATC 7927 Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262 |||||| | || || |||||||| || ||||| || || ||||| || | | || || Sbjct 7928 TCATGTGCTAGCCTTTTTTGCCGCCTCAGACGGGATTGTTAATGAAAACCTCGTCGAGCG 7987 Query 61263 TTTCGCGCAG-GAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCA 61321 || |||| || ||||| | | ||||| | | || || || || || ||| | Sbjct 7988 GTT-TAGCAGTGAAGTGCAGATTCCTGAGGCTAGATTCTTTTATGGATTTCAAATTATGA 8046 Query 61322 TGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACAT 61370 |||| ||| ||||||| || | || || | |||||||| ||||| Sbjct 8047 TGGAAAATATCCACTCTGAAACTTATTCGCTTTTAATCGATACTTACAT 8095 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397534184232560