Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798795.1_202014-12-08] 6,350 sequences; 49,942,550 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq133 288 2e-75 >seq133 Length=7852 Score = 288 bits (318), Expect = 2e-75 Identities = 236/281 (84%), Gaps = 7/281 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| || |||||| ||||||||||| ||||||||||||||||||||| Sbjct 6365 GTACGAGAGGAACCGCTGA-TTCAGA-TAATTGGTTTTGGCGGCTGTCTGACCAGGCAGT 6422 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 6423 GCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 6482 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGG---CTTCGGCCCCG 177 ||| | || || | |||| ||||||||||||||||||||||||| || ||||| | Sbjct 6483 GAAAGCGGCGAGTACCTCCCACACATCGTAGTCGGATACGAATAGGCCCCTAGGGCCCTG 6542 Query 178 AACCTTAGCAGGCCGGCAACGGGCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGATT 237 || ||||||||| ||||| || || | ||| | ||| ||| ||||| || || Sbjct 6543 AATCTTAGCAGGTCGGCATTGGTGCTCGGGGAGAAATCCTGGGTGCT-AGCTGACGTCTT 6601 Query 238 GCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 ||||||| | |||||| |||||||| |||||||| ||||| Sbjct 6602 GCAATTT-AACATGCGTGGGGATAAAACCTTTGCATACGAC 6641 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819149606400