Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Escovopsis_20weberi_20[genbank_20GCA_5F001278495.1_202015-09-02] 29 sequences; 27,200,907 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq8 297 2e-75 seq1 179 3e-40 >seq8 Length=1130364 Score = 297 bits (328), Expect = 2e-75 Identities = 649/965 (67%), Gaps = 18/965 (2%) Strand=Plus/Minus Query 66002 GGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACA 66061 || ||||| || || || ||||||||||| || | |||||| || |||| ||||||| Sbjct 758005 GGCAGGGCCAGGGACGCCAGGTTGCAGACGGCCACCTCGTCGGGGGCGGAGTACTCGATG 757946 Query 66062 ATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGA 66121 || |||||||| || || || ||| || || || | |||| || || ||||| | Sbjct 757945 ATCTCGGTGCAGAGGTTGGAGCTGCGGATCGTTCCTAGGTTCTTCTGGTTGCTCTTCCTG 757886 Query 66122 TTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATG 66181 ||||| || |||||||||| |||| | || |||||||||| |||| ||| | |||| Sbjct 757885 TTGCAGGCGTCCTTGTACAGCATGAAGGGGTTGCCGGTCTCCGTCTGGGCCTCGAGGATG 757826 Query 66182 GCGTGCCAAAGA----GCGCGTGCCTTCACCGTACGT--ACCGCCCTACCTTTGCGTTCG 66235 | || ||| || |||| | | | | || || ||||| ||||| ||| Sbjct 757825 GAGTACCACAGCTTCTGCGCACGAATGGTCT-TGCGGCCACGGCCCT-CCTTT----TCG 757772 Query 66236 TAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTG 66295 || | |||||| ||| ||||| || || | |||| || | || || | | Sbjct 757771 TACTTTTCGTACAGGGCCTCGAACTCTTGGCCGTAGCAGTCGGCGAGGCCGGGGCATTCG 757712 Query 66296 TGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGT 66355 | || ||||| |||| ||| || | || || ||||| ||| || ||||| || Sbjct 757711 TTGGGGCACATGAGCGTCCAGTCGAGGTTCTTCTCGACACGCTTCATGAAGAGATCGGGG 757652 Query 66356 ATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGC 66415 ||||||||||| ||| || || || || || |||||| |||| || || |||||| Sbjct 757651 ATCCAGAGGGCCAGGAACAGGTCCCGGGCACGGACCTCCTCCTTGCCATGGTTCTTGCGC 757592 Query 66416 AAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCC 66475 |||||||||||||| |||| |||||| ||||| || || |||||||| ||||| | ||| Sbjct 757591 AAGTCGAGGAACTCGAAGACGTCGGCGTGCCAGGGCTCAAGGTAGATTGCGAAGGCGCCG 757532 Query 66476 ATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATC 66535 || ||| ||| || ||||||||||| | ||| |||||| |||| || | ||| Sbjct 757531 GGGCGCTTGTTGCCGCCCTGGTCGACGTATCTGGCGGTGTTGTTGTAGACGCGGAGCATG 757472 Query 66536 GGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATA 66595 || | | ||||| || | |||||||| ||| |||| ||| || || || || Sbjct 757471 GGAATAATGCCGTTGGAGGTTCCATTGGTTCCGGCGATATAGGAGCCAGTGGCACGGATG 757412 Query 66596 TCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAG---ATGGCAGCACAATCGGCC 66652 ||| || |||||||| || ||||| ||| |||| ||| ||||| |||| | Sbjct 757411 CGGTGGACGTTCAGACCGATGCCACCAGCCATCTTGGAGATCATGGC-GCACGTCTTGAG 757353 Query 66653 ACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTA 66712 |||| | | ||||| || ||| ||| |||| ||| | | | |||| || Sbjct 757352 GGTGTC--GTAGATGCCCTCGATGCTGTCGTCCTTCATGTCGACCAAGAAGCACGAGGAC 757295 Query 66713 AGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGG 66772 || |||| | ||| || |||| |||||||||||| | |||||||| ||| | | | Sbjct 757294 AGCTGGGCCTGGGGGGTTCCGGCGTTGAAGAGGGTGGGAGACGCGTGCGTGAAGAACTTG 757235 Query 66773 CGAGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGT 66832 | |||||| |||||| ||||||| ||| || |||| || || || |||| Sbjct 757234 CTGGACATGAGATTGTATGTCTCGAGGACTCGCTCGATGTCGTCTCCCCAGATGCCGACG 757175 Query 66833 GCACATCGCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCCTTGATATGCATTAAG 66892 || || ||| | | || ||||| || ||||| | | | | | || | || | Sbjct 757174 GCGACTCTCATGATCATGTGCTGAGGACGCTCGACGATCTTACCGTCGAGCTTCAAGAGA 757115 Query 66893 TAGGAGCGTTCCAGGGTCTTGATACCAAAGTACGAGTAATTGAAATCGTTAGCATGCACG 66952 || || || || || ||||||| || |||||| ||| ||||| || | | | ||| Sbjct 757114 TACGATCGCTCAAGAGTCTTGAAGCCGAAGTACTGGTAGTTGAAGTCCCTCTCGTAGACG 757055 Query 66953 ATGGC 66957 ||||| Sbjct 757054 ATGGC 757050 >seq1 Length=5717297 Score = 179 bits (198), Expect = 3e-40 Identities = 565/857 (66%), Gaps = 24/857 (3%) Strand=Plus/Minus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 ||||||| |||||||| ||||| || || || |||||||| | || ||| |||| || Sbjct 4504474 ATTTGGCAAATGTACAAGAAGGCCGAGGCCTCATTCTGGACCGCCGAAGAGATCGACCTG 4504415 Query 61147 TCCAAAGACATGAATGACTGGGAG---CGTTT-ATCGAGCGGTGAACAACATTTCATTAA 61202 ||||| |||| | |||||| | || | | |||| | ||| || | ||||| Sbjct 4504414 TCCAAGGACACTCACGACTGGAACAACCGCCTGAACGAG-GACGAAAAATACTTCATCTC 4504356 Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262 || | | || ||||||||||| || || || || ||||| ||||| | | || || Sbjct 4504355 CCACATCCTCGCCTTCTTTGCCGCCTCTGATGGAATTGTCAACGAGAACCTGGTTGAGCG 4504296 Query 61263 TTTC-GCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCA 61321 ||| ||| | ||||| || | | ||||| || || |||||||| |||||||| | Sbjct 4504295 ATTCAGCGGA-GAGGTCCAGATCCCTGAGGCCCGGTGCTTCTACGGTTTCCAGATCATGA 4504237 Query 61322 TGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGG 61381 ||||||| ||||||| |||| ||| | ||||| || || ||||||| ||| | Sbjct 4504236 TGGAGAACATCCACTCCGAGACCTACTCCCTCCTCATTGACACCTACATCAAGGACACCG 4504177 Query 61382 CGGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCG---GAAAG 61438 | | || | | ||||| ||| |||| ||||| || | | | || ||| | Sbjct 4504176 CCCAGCGGACGCACCTCTTCAACGCCGTCGACACGATTCC--CTG-CATCCGCAAGAAGG 4504120 Query 61439 CGGATTGGGCCTTCAATTGGATCACCAGTACAACGGCT--ACATTTGGTGAACGATTGCT 61496 | ||||||||| | ||||| | | |||| || || |||| | || | | Sbjct 4504119 CCGATTGGGCCCTGCGATGGATTTC--GGACAAGAACTCCACCTTTGCCCAGCGTCTCGT 4504062 Query 61497 GGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTT 61556 || ||||| | ||||||||| | || || || || | ||||| | || || ||| | Sbjct 4504061 TGCCTTTGCCGCCGTCGAGGGTATCTTCTTTAGCGGTGCTTTTGCATCCATTTTCTGGCT 4504002 Query 61557 GAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGA 61616 ||||| || || || |||||||| || |||||| ||| ||| | || || || ||||| Sbjct 4504001 CAAGAAGCGCGGTCTCATGCCCGGCCTCACCTTCTCCAACGAGCTCATCTCTCGTGACGA 4503942 Query 61617 GGGCATGCATTGTGATTTTG-CTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGT 61675 ||| | || || |||| |||| | || | || ||| | || || ||| | Sbjct 4503941 GGGTCTCCACACGGACTTTGCCTGTCT--CT-TGCACTCGC-ACCTCCGCAACCGTGCCA 4503886 Query 61676 CGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGA 61735 ||||| | | | || | || || || | ||||| ||||| ||| ||| Sbjct 4503885 GCAAGGAGTCGATCCGAGCCATCATCACCGATGCCGTCGCCATCGAGCAGGAGTTTTTGA 4503826 Query 61736 CTGACGCTTTGCCCGTCT-CACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATT 61794 | || || || |||| | | || | |||||||| | || ||| |||||| || Sbjct 4503825 CCGAGGCCCTG-CCGTGTGCCCTGCTGGGCATGAACTCCACCCTGATGAAGCAGTACATC 4503767 Query 61795 GAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAA 61854 || || || ||||||||||| | ||| | || | || |||||| || | | Sbjct 4503766 GAGTTCGTCGCCGACCGTCTCCTCATCGCCCTCGGCAACGAGAAGATCTACAACGCCACC 4503707 Query 61855 AACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAA 61914 ||||| || || |||||||| | || || || | |||||||| || || || ||||| Sbjct 4503706 AACCCCTTCGACTTCATGGAGAACATCTCCCTCGGCGGCAAGACCAACTTCTTTGAGAAG 4503647 Query 61915 CGTGTAGGCGACTATCA 61931 ||||| || |||||||| Sbjct 4503646 CGTGTCGGTGACTATCA 4503630 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567859484560