Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20mesophila_20[genbank_20GCA_5F000836275.1_202015-02-23] 9 sequences; 29,273,723 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq6 268 7e-67 seq3 134 1e-26 >seq6 Length=3112757 Score = 268 bits (296), Expect = 7e-67 Identities = 645/964 (67%), Gaps = 34/964 (4%) Strand=Plus/Plus Query 65993 ACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTA 66052 ||||| |||| || || || || || || |||||||| || | ||| || ||||| ||| Sbjct 985777 ACAAAGGTGGGCAGAGCGAGGGAGGCAAGATTGCAGACGGCAACCTCATCGGGAGCAGTA 985836 Query 66053 TACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTA 66112 ||||||||||| |||||||| ||||| || | ||||| || | ||||| || || Sbjct 985837 TACTCGACAATCTCGGTGCAAAGATTGGAGCTTCTGATGGTACCAAGATTCTTCTGGTTG 985896 Query 66113 CTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGAC 66172 ||||| ||||| ||||||||||||| ||| || || || |||||||| || | | Sbjct 985897 CTCTTCTCGTTGCAGGCATCCTTGTACAGCATATAAGGGGTACCGGTCTCGGTCTGTGCC 985956 Query 66173 TCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACCGTACG--TACCGC--CCTACCTTT 66228 || | ||||||| ||| || | || || || || | ||||| ||| | || Sbjct 985957 TCGAGAATGGCGTACCAGAGCTTCTGGGCTTTGACAGTCTGGCGACCGCGGCCTTCTTT- 986015 Query 66229 GCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGG 66288 ||||| |||||||| ||| |||||| | || | || || | |||| || Sbjct 986016 ---CTCGTACTGTTCGTAAAGGGCTTCGAACTCCTTGCCATAAACATCAGCGAGACCAGG 986072 Query 66289 ACACTTGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAG 66348 | || || || || | || | |||||| | || || ||||| |||| || || Sbjct 986073 AGCCTCGTTGGGGCAGAAAAGGGTCCAATCCTGGTTCTTCTCAACACGCTGCATGAAGAG 986132 Query 66349 ATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATT 66408 ||| ||| |||| ||||||||||| || || || || || || || |||| || || Sbjct 986133 ATCGGGTGTCCACAGGGCGTAGAACAGGTCACGAGCACGAACTTCTTCCTTGCCATGGTT 986192 Query 66409 TTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAA 66468 || | || || || |||| |||| ||||| |||||||| |||| ||| ||||| || Sbjct 986193 CTTTCTCAGGTTCAGCCACTCGAAGACATCGGCGTGCCATGGCTCCAAGTAAATGGCAAA 986252 Query 66469 CGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACG 66528 | || || ||| ||| || ||||||||||||||||| ||||||||||| | Sbjct 986253 GGCACCGGGCCGCTTGTTGCCTCCCTGGTCGACGTAGCGAGCAGTGTTGTTGAAGACTCT 986312 Query 66529 CAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGC 66588 | ||| || | ||| ||||| ||| |||| ||||| ||| |||| ||| || || Sbjct 986313 AAGCATGGGGATGAGGCCGTTTGATGTGCCGTTGGTTCCGGCGATATAGGAGCCAGTGGC 986372 Query 66589 CCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACA-AT 66647 || || ||| | || ||||||||||| ||||| ||||| ||||| ||||| | Sbjct 986373 ACGAATGCAATGAGCGTTGAGACCAATACCGCCGGCGGTCTTGGAGATCATTGCACAGGT 986432 Query 66648 C-GGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATG---GTCAGGAGGTAG 66703 | | | | || | ||||| |||||| ||| ||| ||| ||| || | || Sbjct 986433 CTTGAGAGTATC--ATAGATGCCTTCAATGCTGTCGGACTTCATGTCAATCAAGAAGCAG 986490 Query 66704 CATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTA 66763 |||| | ||||||| || ||| | || ||| ||||| || | || || || Sbjct 986491 GATGA---CAACTGGGGTTGAGGAGTGCCAGCGTTGAAAAGGGTTGGCGAGGCATGAGTG 986547 Query 66764 AAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGA 66823 ||| | | | |||||| ||||| ||||| ||| | || | || | ||| ||| Sbjct 986548 AAGCACTTCTGGGACATGAGGTTGTATGTCTCAATGGCCTTCTCGACGTCATTGCCGTGA 986607 Query 66824 AT-CCCGAGTGCACATCGCATCAGGAGGTATTGAGGCCGTTCGACCA-------GCCGAT 66875 || ||| | |||| ||||| || || | ||| || | || | | ||| || Sbjct 986608 ATGCCCACGGCCACA-CGCATGAGAAGATGTTGTGGTCTCTCTGCAACTTTGTTGCCAAT 986666 Query 66876 CCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCAAAGTACGAGTAATTGA 66935 ||||| || | |||||| | |||| ||||||| ||||||||| ||| |||| Sbjct 986667 -CTTGA---GC---AGGTAGGATCTCTCCAAAGTCTTGAAACCAAAGTATTGGTAGTTGA 986719 Query 66936 AATC 66939 | || Sbjct 986720 AGTC 986723 Score = 96.9 bits (106), Expect = 3e-15 Identities = 322/493 (65%), Gaps = 10/493 (2%) Strand=Plus/Plus Query 65077 ATCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGT 65136 |||||| |||||||| || | || ||| ||| | || | |||||||||||||| || Sbjct 984879 ATCGACGGTGAACTGAATGGGGGCAGTAGCAGCCATCGTGCGGAGATAGTACATGCCAGT 984938 Query 65137 CTTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAAT-TCGGCT 65195 |||||| || ||| || |||||||| |||| |||| |||| | | |||| Sbjct 984939 CTTGAGACCCATCTTCCAGCCAGCAAAATGCATGGATG-TAATCTTGCCCATGGTGGGCT 984997 Query 65196 CGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCA 65255 | | ||| || ||||| || || |||||| ||| | ||| || || || |||| Sbjct 984998 CTTTAAGATGGATGTTCAATGATTGCGACTGATCAATGAAGGCACCTCGGTCGGCCGCCA 985057 Query 65256 TGTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGT-ACCTCA 65314 | | | || || || || |||||||| |||||||| || | | | | || Sbjct 985058 TCTGCAGGACTGTGCGCTGGGAGATTTCCCAGACAGTCTTGTAGAGT-GCCTTGAGATCG 985116 Query 65315 ATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCATC 65374 ||||| | || | || || || |||| ||||| || || || ||| Sbjct 985117 GCGGGAATGTTGGGGATATTTTGAACGGAGCCACCTTCGGCAATGATACGGTTCTTCATG 985176 Query 65375 GACTCTGACCACAAACCCAAATCGATAAGATGTT---GAACCAAGTGACGATTGATGACT 65431 || ||||| | || | |||| || | | ||| | | || | |||| |||| Sbjct 985177 TTGTCCGACCAAAGTCCGAGGTCGACGAGGTCCTTCAGAAGCCA-TG--GGTTGACGACT 985233 Query 65432 TGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGAT 65491 |||||||| || | || ||||| || ||||||||||| ||| || || ||| | Sbjct 985234 TGGAACTCACCAGCCAAGACACGGCGAGAGTAGATGTTGGAGGTGTATGGCTCGAAGCAC 985293 Query 65492 TCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAG 65551 ||| ||||||| || || || | || ||||||||||||||||| || || | | ||| Sbjct 985294 TCATTGTTGCCAAGGATCTGAGAGGTCGATGCAGTTGGCATGGGTGCAACGAGAAGAGAG 985353 Query 65552 TTTCGCAATCCGT 65564 || || | |||| Sbjct 985354 TTGCGAACACCGT 985366 >seq3 Length=5104443 Score = 134 bits (148), Expect = 1e-26 Identities = 404/615 (66%), Gaps = 19/615 (3%) Strand=Plus/Minus Query 61325 AGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGG 61384 |||| | ||||| |||||||||||| | |||||||| || ||||||| ||| | | Sbjct 4692007 AGAACATTCACTCCGAGATGTACAGTTTGCTCATCGACACATACATCAAGGACCCTAAGC 4691948 Query 61385 AACGTGAACGAT-TGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCG---GAAAGCG 61440 || || | | ||||| | ||||| || || || || | | | || ||| || Sbjct 4691947 AAAA-GACCTACCTGTTCGACGCCATTGACACCATTCC--CTGC-ATCCGCAAGAAGGCC 4691892 Query 61441 GATTGGGCCTTCAATTGGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCA 61500 || ||||| || || |||||| | | | | | |||||| | || || ||||| Sbjct 4691891 GACTGGGCTTTGAAATGGATCGCAGATGATGCTTCGTCGTTTGGTCAGCGTCTGGTGGCA 4691832 Query 61501 TTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAG 61560 || || | || |||||| | || ||| ||| || || ||||| ||||| ||||||||| Sbjct 4691831 TTCGCTGCTGTTGAGGGTATCTTCTTCTCTGGCTCATTCGCCGCCATCTTCTGGTTGAAG 4691772 Query 61561 AAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGC 61620 ||||||||||| ||| |||||||| ||| |||||||| || || ||||||||| Sbjct 4691771 GCCAAGGGACTTATGCCTGGTTTGACCTTCTCCAACGAGTTGATCTCTCGAGACGAGGGC 4691712 Query 61621 ATGCATTGTGATTTTG-CTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCGGA 61679 ||||| || |||| ||| | |||| || | | | || | | | || Sbjct 4691711 ATGCACACCGACTTTGCCTGCT----TATT---ACTTCAGCACCTTAACCACAAGCCAGA 4691659 Query 61680 ---GGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGAC 61736 ||| | | | || | |||||| || | ||||| | ||||| |||| Sbjct 4691658 CCCCAAGCTCATCGAAGCCATCATCACTGAGGCCGTTGCCATCGAGAAAGAATTCTTGAC 4691599 Query 61737 TGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGA 61796 || ||| | ||| | || | |||||||| || ||| |||||||| || Sbjct 4691598 CGATGCTCTTCCCTGTGCTCTTCTTGGCATGAACGCCAAGCTGATGCAACAGTATATCGA 4691539 Query 61797 ATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAAA 61856 || || |||||||||||| | | | |||| | ||||| |||| || | | || Sbjct 4691538 GTTCGTCGCCGACCGTCTGCTCCTGGCCATGGGAAACAAGCGCGTCTACAACGCAACTAA 4691479 Query 61857 CCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACG 61916 ||| || |||||||| | || || || | ||||||||| || || |||||||| || Sbjct 4691478 CCCCTTCAGCTTCATGGAGAACATCTCCCTTGCTGGCAAGACCAACTTCTTCGAGAAGCG 4691419 Query 61917 TGTAGGCGACTATCA 61931 || || |||||||| Sbjct 4691418 AGTGGGTGACTATCA 4691404 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567956391760