Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20oligosperma_20[genbank_20GCA_5F000835515.1_202015-02-23]
143 sequences; 38,224,514 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq15 127 7e-27
seq3 118 3e-24
>seq15
Length=477855
Score = 127 bits (140), Expect = 7e-27
Identities = 79/85 (93%), Gaps = 0/85 (0%)
Strand=Plus/Plus
Query 459 CCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAAT 518
|||||||||||||| || ||||||| |||||||||||||| |||||||||||||| ||||
Sbjct 130233 CCGTTTACCCGCGCCTGTTTGAATTCCTTCACTTTGACATCCAGAGCACTGGGCACAAAT 130292
Query 519 CACATTGCGTCAACATCACTTTCTG 543
||||||||||||||| |||||||||
Sbjct 130293 CACATTGCGTCAACACCACTTTCTG 130317
Score = 98.7 bits (108), Expect = 3e-18
Identities = 71/80 (89%), Gaps = 3/80 (4%)
Strand=Plus/Plus
Query 359 AGTAGATAGGGACAGTGG-GAATCTCGTTAA--TCCATTCATGCGCGTCACTAATTAGAT 415
|||||| ||||||||| ||||||||| || ||||||||||||||||||||||||||
Sbjct 129805 AGTAGACGGGGACAGTGAAGAATCTCGTCAAAGTCCATTCATGCGCGTCACTAATTAGAC 129864
Query 416 GACGAGGCATTTGGCTACCT 435
||||||||||||||| ||||
Sbjct 129865 GACGAGGCATTTGGCCACCT 129884
>seq3
Length=4123400
Score = 118 bits (130), Expect = 3e-24
Identities = 77/85 (91%), Gaps = 0/85 (0%)
Strand=Plus/Plus
Query 459 CCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAAT 518
||| ||||||||||||| |||||||||||||||| ||||||| ||||||||| ||| |||
Sbjct 228996 CCGGTTACCCGCGCTTGTTTGAATTTCTTCACTTCGACATTCGGAGCACTGGACAGGAAT 229055
Query 519 CACATTGCGTCAACATCACTTTCTG 543
| ||||||||||||||||||||||
Sbjct 229056 CGTATTGCGTCAACATCACTTTCTG 229080
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1635197661664
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |