Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20oligosperma_20[genbank_20GCA_5F000835515.1_202015-02-23] 143 sequences; 38,224,514 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq15 127 7e-27 seq3 118 3e-24 >seq15 Length=477855 Score = 127 bits (140), Expect = 7e-27 Identities = 79/85 (93%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 459 CCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAAT 518 |||||||||||||| || ||||||| |||||||||||||| |||||||||||||| |||| Sbjct 130233 CCGTTTACCCGCGCCTGTTTGAATTCCTTCACTTTGACATCCAGAGCACTGGGCACAAAT 130292 Query 519 CACATTGCGTCAACATCACTTTCTG 543 ||||||||||||||| ||||||||| Sbjct 130293 CACATTGCGTCAACACCACTTTCTG 130317 Score = 98.7 bits (108), Expect = 3e-18 Identities = 71/80 (89%), Gaps = 3/80 (4%) Strand=Plus/Plus Query 359 AGTAGATAGGGACAGTGG-GAATCTCGTTAA--TCCATTCATGCGCGTCACTAATTAGAT 415 |||||| ||||||||| ||||||||| || |||||||||||||||||||||||||| Sbjct 129805 AGTAGACGGGGACAGTGAAGAATCTCGTCAAAGTCCATTCATGCGCGTCACTAATTAGAC 129864 Query 416 GACGAGGCATTTGGCTACCT 435 ||||||||||||||| |||| Sbjct 129865 GACGAGGCATTTGGCCACCT 129884 >seq3 Length=4123400 Score = 118 bits (130), Expect = 3e-24 Identities = 77/85 (91%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 459 CCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAAT 518 ||| ||||||||||||| |||||||||||||||| ||||||| ||||||||| ||| ||| Sbjct 228996 CCGGTTACCCGCGCTTGTTTGAATTTCTTCACTTCGACATTCGGAGCACTGGACAGGAAT 229055 Query 519 CACATTGCGTCAACATCACTTTCTG 543 | |||||||||||||||||||||| Sbjct 229056 CGTATTGCGTCAACATCACTTTCTG 229080 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635197661664