Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Falciphora_20oryzae_20[genbank_20GCA_5F000733355.1_202014-07-25]
247 sequences; 50,779,446 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq29 210 4e-52
seq5 194 3e-47
>seq29
Length=493206
Score = 210 bits (232), Expect = 4e-52
Identities = 153/177 (86%), Gaps = 9/177 (5%)
Strand=Plus/Plus
Query 39 AGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTA----- 93
|||||||| ||| ||||||||| |||| ||| ||||| |||||||||||||||||
Sbjct 31894 AGGGTAAAGCTAGCCTGTCTCACGACGATCTGAACCCGGCTCACGTTCCCTATTATCAGT 31953
Query 94 ---GTGGGTGAACAA-TCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCG 149
|||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||
Sbjct 31954 CCAGTGGGTGAACAAATCCAACGCATACCGAATTCTGCTTCGATATGATAGGAAGAGCCG 32013
Query 150 ACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTT 206
||||| ||||| |||||| ||||||||||||||||||||| |||||||||| |||
Sbjct 32014 ACATCTCCGGATCTAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCGGTT 32070
Score = 161 bits (178), Expect = 2e-37
Identities = 91/92 (99%), Gaps = 0/92 (0%)
Strand=Plus/Plus
Query 207 ATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGA 266
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 32465 ATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGA 32524
Query 267 TAGGCCACACTTTCATGGTTTGTATTCACCTC 298
||||||||||||||||||||||||||||| ||
Sbjct 32525 TAGGCCACACTTTCATGGTTTGTATTCACATC 32556
>seq5
Length=1921117
Score = 194 bits (214), Expect = 3e-47
Identities = 109/110 (99%), Gaps = 0/110 (0%)
Strand=Plus/Plus
Query 36 AGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGT 95
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1539689 AGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGT 1539748
Query 96 GGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGA 145
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1539749 GGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGA 1539798
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854397889632
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |