Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Falciphora_20oryzae_20[genbank_20GCA_5F000733355.1_202014-07-25] 247 sequences; 50,779,446 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq29 210 4e-52 seq5 194 3e-47 >seq29 Length=493206 Score = 210 bits (232), Expect = 4e-52 Identities = 153/177 (86%), Gaps = 9/177 (5%) Strand=Plus/Plus Query 39 AGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTA----- 93 |||||||| ||| ||||||||| |||| ||| ||||| ||||||||||||||||| Sbjct 31894 AGGGTAAAGCTAGCCTGTCTCACGACGATCTGAACCCGGCTCACGTTCCCTATTATCAGT 31953 Query 94 ---GTGGGTGAACAA-TCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCG 149 |||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||| Sbjct 31954 CCAGTGGGTGAACAAATCCAACGCATACCGAATTCTGCTTCGATATGATAGGAAGAGCCG 32013 Query 150 ACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTT 206 ||||| ||||| |||||| ||||||||||||||||||||| |||||||||| ||| Sbjct 32014 ACATCTCCGGATCTAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCGGTT 32070 Score = 161 bits (178), Expect = 2e-37 Identities = 91/92 (99%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 207 ATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGA 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 32465 ATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGA 32524 Query 267 TAGGCCACACTTTCATGGTTTGTATTCACCTC 298 ||||||||||||||||||||||||||||| || Sbjct 32525 TAGGCCACACTTTCATGGTTTGTATTCACATC 32556 >seq5 Length=1921117 Score = 194 bits (214), Expect = 3e-47 Identities = 109/110 (99%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 36 AGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGT 95 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 1539689 AGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGT 1539748 Query 96 GGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGA 145 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1539749 GGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGA 1539798 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854397889632