Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Falciphora_20oryzae_20[genbank_20GCA_5F000733355.1_202014-07-25] 247 sequences; 50,779,446 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq90 194 5e-47 seq5 96.9 1e-17 seq80 84.2 7e-14 >seq90 Length=92941 Score = 194 bits (214), Expect = 5e-47 Identities = 143/167 (86%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 19 AGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTCCCCGTGTCGGGATTGGG 78 ||||||||||||||||||||||||||||| | ||||||||||| ||| ||||| |||||| Sbjct 2213 AGACCCAAAAGAGCCCTGTATCAGTATTTCTCGTCACTACCTCGCCGCGTCGGCATTGGG 2272 Query 79 TAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCG 138 |||||||||||||||||||||||||||||||| |||||||||||||| |||||| Sbjct 2273 TAATTTGCGCGCCTGCTGCCTTCCTTGGATGTAAACGCCGTTTCTCAGGCGTTTTCTCCG 2332 Query 139 GAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCA 185 | |||| |||||| | ||||||||||||| |||| || ||||| Sbjct 2333 GGGTCGAGCCCTAACCCTCCGTTACCCGTTGTCACCACGGCTGGCCA 2379 Score = 77.0 bits (84), Expect = 1e-11 Identities = 44/45 (98%), Gaps = 0/45 (0%) Strand=Plus/Plus Query 460 ACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||| |||||||||||||||||||||||| Sbjct 2387 ACATGCATGGCTTAATCTTTAAGACAAGCATATGACTACTGGCAG 2431 >seq5 Length=1921117 Score = 96.9 bits (106), Expect = 1e-17 Identities = 61/66 (92%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 23 CCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAAT 82 || |||||||||||||||||||||| | ||||||||||| ||||||||| |||||||||| Sbjct 1377017 CCCAAAGAGCCCTGTATCAGTATTTCTCGTCACTACCTCACCGTGTCGGCATTGGGTAAT 1377076 Query 83 TTGCGC 88 |||||| Sbjct 1377077 TTGCGC 1377082 >seq80 Length=157249 Score = 84.2 bits (92), Expect = 7e-14 Identities = 49/51 (96%), Gaps = 0/51 (0%) Strand=Plus/Plus Query 194 CCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCAAG 244 || ||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 54239 CCGTCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCGCAAG 54289 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510396269312