Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Falciphora_20oryzae_20[genbank_20GCA_5F000733355.1_202014-07-25] 247 sequences; 50,779,446 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq48 381 5e-101 seq50 141 7e-29 >seq48 Length=300044 Score = 381 bits (422), Expect = 5e-101 Identities = 673/969 (69%), Gaps = 10/969 (1%) Strand=Plus/Plus Query 65995 AAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATA 66054 ||||| || || || || || || |||||||| ||||| | |||||| || || | || Sbjct 143248 AAACTGCGGCAGCGCCAGCGACGCCAGGTTGCACACAGCCACCTCGTCGGGCGCCGAGTA 143307 Query 66055 CTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACT 66114 ||||| || ||||||||||| || || ||| |||||||||| |||| || || || Sbjct 143308 CTCGATGATCTCGGTGCACAGGTTGGAGCTGCGAATGGTGCCCAGGTTCTTCTGGTTGCT 143367 Query 66115 CTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTC 66174 |||||| ||||| |||||||||| |||| | || |||| ||||| |||| ||| Sbjct 143368 CTTGCGGTTGCAGTGGTCCTTGTACAGCATGAAGGGGTTGCCAGTCTCGGTCTGGGCCTC 143427 Query 66175 AATGATGGCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCCCTA-CCTTTGCGTT 66233 | |||||| | ||| || | ||||| | ||| | | | ||||| || | || | Sbjct 143428 GAGGATGGCATACCACAGCTTCTGCGCCTTGAGCGT-CTTGCGGCCCTTGCCCTCACGCT 143486 Query 66234 CGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACT 66293 |||| | ||||| || ||||| || || | || | ||| | || |||| Sbjct 143487 CGTACTTCTCGTACAGAGCCTCGAACTCCTCGCCGTAGCAGTCCGCCAGGCCGGGGCACT 143546 Query 66294 TGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAG 66353 || || ||||| |||| ||| || || | || || || || ||| || || || | Sbjct 143547 CGTTGGGGCACATGAGCGTCCAGTCGCCGTTCTTCTCAACCCGCTTCATGAACAGGTCCG 143606 Query 66354 GTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGC 66413 | ||||| ||||| |||||| ||||| || || |||||| ||||||| || |||| Sbjct 143607 GGATCCACAGGGCCAGGAAGAGGTCGCGGGCGCGGATCTCCTCCTTGCCGTGGTTCTTGC 143666 Query 66414 GCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGC 66473 ||| |||||||||||| || | |||||| |||||||| |||||||||||||| || | || Sbjct 143667 GCAGGTCGAGGAACTCGAACACGTCGGCGTGCCATGGCTCCAGGTAGATGGCAAAAGCGC 143726 Query 66474 CCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACA 66533 | || ||| |||||| |||||||| ||||| || ||||| || ||||||| || Sbjct 143727 CGGGGCGCTTGTTGCCACCCTGGTCGACATAGCGTGCCGTGTTGTTAAAAACACGCAGCA 143786 Query 66534 TCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGT-GCCCGT 66592 | || |||| || || || |||| ||||||||| ||||| ||| || ||| || || Sbjct 143787 TGGGCACGATGCCATTGGAGGTGCCGTTGGTGCCGGCGATGTAGGAGCC-CGTGGCACGA 143845 Query 66593 ATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACA-ATC-GG 66650 || ||| | || || || |||||||||||| |||| || || ||||| || | Sbjct 143846 ATGCGGTGGATGTTGAGGCCGATACCACCGGCCATCTTGGAAATCATGGCACAGGTCTTG 143905 Query 66651 CCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAAC 66710 |||| | | || || || ||| ||| |||| ||| | |||| |||| || Sbjct 143906 AGGGTGTC--GTAGATACCATCGATGCTGTCGTCCTTCATGTCGACGAGGAAGCACGATG 143963 Query 66711 TAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAAT 66770 || |||| | ||| ||| |||| |||||| ||||||| ||||| || ||||| | Sbjct 143964 ACAGCTGGGCCTGGGGAGTGCCGGCGTTGAAGAGAGTGGGTGAGGCGTGGGTGAAGTACT 144023 Query 66771 GGCGAGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGA 66830 || |||||| ||||||||||||| || |||||||| ||||| || |||| Sbjct 144024 TGCTCGACATGAGGTTGTACGTCTCGAGCACGCGCTCAATGTTGTCGCCCCAGATGCCGA 144083 Query 66831 GTGC-ACATCGCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCCTTGATATGCATT 66889 || ||| ||||| | | || || || || ||||| | | | | || | | Sbjct 144084 CAGCGACA-CGCATGATCATGTGCTGGGGGCGCTCGACGATCTTGCCGTCGAGCTTGAGC 144142 Query 66890 AAGTAGGAGCGTTCCAGGGTCTTGATACCAAAGTACGAGTAATTGAAATCGTTAGCATGC 66949 | ||| ||||| ||||||||||||| ||||||||| ||| ||||| || ||| Sbjct 144143 AGGTACGAGCGCTCCAGGGTCTTGAAGCCAAAGTACTGGTAGTTGAAGTCCCGGTCATAG 144202 Query 66950 ACGATGGCC 66958 ||||||||| Sbjct 144203 ACGATGGCC 144211 Score = 111 bits (122), Expect = 1e-19 Identities = 329/494 (67%), Gaps = 14/494 (3%) Strand=Plus/Plus Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137 ||||| ||||||||||| | | || || |||| ||| | || ||||||||||| ||| Sbjct 142349 TCGACGGTGAACTGGATAGGCTGGGCGGCAGCCTGGGTGCGGAGGTAGTACATGCCCGTC 142408 Query 65138 TTGAGGCC-AGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATA-ATTCGGCT 65195 |||||||| ||| ||| | ||| ||||| || | | || |||| | | |||| Sbjct 142409 TTGAGGCCGAGC-TTCCAGCCGGCGAAGTGCATGGACG-TGATCTTGCCCATGGTGGGCT 142466 Query 65196 CGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCA 65255 || || || || || | |||||| ||| |||||| | || || || || |||| Sbjct 142467 CGCGCATGTGGATGTTGAGCGACTGCGACTGGTCGATGAAGGCGCCGCGGTCGGCTGCCA 142526 Query 65256 TGTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCG--ACGT-ACCT 65312 | | | || || ||| ||||||||||| |||||||||||||| || ||| Sbjct 142527 TCTGGACGACGGTGCGCTGCGAGATCTCCCAGACCGTCTTGTACAGGCGCTTGGTGTCCT 142586 Query 65313 CAATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCA 65372 | ||| || | |||| ||||| || || | || || ||||| || || Sbjct 142587 C--GGGGACGCT-GGCGATGTTCTGGATGGAGCCGCCCTCGGCGATGATGCGGTTCTTCA 142643 Query 65373 TCGACTCTGACCACAAACCCAAATCGATAAGAT-GTTGAACCAAGTGAC-GATTGATGAC 65430 | || ||||||| || | |||| || | |||| | || || | |||| ||| Sbjct 142644 TGTTGTCGGACCACAGGCCAAGCTCGACCAGGTCCTTGAGC--AGCCACGGGTTGACGAC 142701 Query 65431 TTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGA 65490 ||||||||||||| || || || || ||||||||||| ||| ||| || ||| | Sbjct 142702 CTGGAACTCGCCGGCGAGCACGCGGCGCTGGTAGATGTTGGATGTGTAGGGCTCGAAGCA 142761 Query 65491 TTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGA 65550 || ||||||| || || || | || || || |||||||| || || | || || Sbjct 142762 CTCGTTGTTGCCCAGGATCTGCGACGTGCTGGCTGTGGGCATGGGCGCCACAAGCAGCGA 142821 Query 65551 GTTTCGCAATCCGT 65564 ||| |||| |||| Sbjct 142822 GTTGCGCACACCGT 142835 >seq50 Length=290317 Score = 141 bits (156), Expect = 7e-29 Identities = 212/297 (71%), Gaps = 7/297 (2%) Strand=Plus/Plus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||| ||||| || || || |||||||| | |||||| |||| || Sbjct 112258 ATCTGGCAGATGTACAAGAAGGCCGAGGCCTCGTTCTGGACAGCCGAGGAGATCGACCTG 112317 Query 61147 TCCAAAGACATGAATGACTGGGAGC----GTTTATCGAGCGGTGAACAACATTTCATTAA 61202 ||||| ||| | | |||||| | | | | ||| || ||| | | ||||| Sbjct 112318 TCCAAGGACCTCCACGACTGGAACAACAAGCTCAACGA-CGATGAGAAGTACTTCATCTC 112376 Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262 |||| | | || ||||||||||| ||||| || |||||||| ||||| || |||| || Sbjct 112377 ACATATCCTCGCCTTCTTTGCCGCCTCGGATGGCATCGTCAACGAGAACTTGGTGGAGCG 112436 Query 61263 TTTC-GCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCA 61321 ||| ||| || || || || | ||||| ||||| |||||||| || ||||| | Sbjct 112437 CTTCAGCG-GCGAAGTCCAGGTTCCCGAGGCCCGTTGCTTCTACGGATTTCAGATCATGA 112495 Query 61322 TGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGC 61378 ||||||| ||||||| |||| ||| | || ||||| || ||||||| ||||| Sbjct 112496 TGGAGAACATCCACTCTGAGACCTACTCGCTCCTGATCGACACCTACATCAAGGAGC 112552 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397566803196080