Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Falciphora_20oryzae_20[genbank_20GCA_5F000733355.1_202014-07-25] 247 sequences; 50,779,446 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq42 131 7e-25 seq7 98.7 4e-15 >seq42 Length=391249 Score = 131 bits (144), Expect = 7e-25 Identities = 353/527 (67%), Gaps = 25/527 (5%) Strand=Plus/Plus Query 448639 GGCGCCGTAGGACTTGAAGGAGACGCGCTCCATGTCGCCCAATCGGAGCCCGCCGTGTCG 448698 ||||||||||| | | | || |||||||||| ||||||| || || || |||| | Sbjct 10566 GGCGCCGTAGGCGATCAGGCAGTCGCGCTCCATCTCGCCCAGGCGCAGGCCTCCGTCCCT 10625 Query 448699 CAACTTGCCCTCGGTGGGCTGCCGCGTGAGGA--GCGAGTACGGTCCCCTCTGC-CGCGT 448755 || ||||||||||||||| ||||| |||| ||| | || ||||| || |||| Sbjct 10626 GGACCGGCCCTCGGTGGGCTGGCGCGTCAGGATGGCGCG---GGGCCCCTTGGCGCGCGA 10682 Query 448756 GTGCATCTTCTCCGAGGCCAGTTGCTTGAGGCTCTGGAAGAAGAAGGGCGCGTAGAACAT 448815 ||||||||| ||| | ||| |||||||||| |||| || ||| ||| ||| ||| || Sbjct 10683 GTGCATCTTGTCCTGGACCATGTGCTTGAGGCGCTGGTAGTAGATGGGGCCGTTGAAGAT 10742 Query 448816 GCGGCACGGCATCATCTCGCCCGTCTGGCCGTCCGTAAAGATCGTC-TTGCCCTCGGGCT 448874 | | | | | ||||||||| ||| || ||| | ||| || ||||| | Sbjct 10743 GTAGGCCTCGAGCGGCTCGCCCGTGATGCCCGAGGTGAAG-TAGTCCTTACCCTC---CC 10798 Query 448875 CGATCATGCCCCTCTCCTCCATG---TAGTCCATGAGCTCGGCCACGGAGAG-GTCCGAA 448930 | | | ||| | ||| | | | |||| |||| |||| | | || || | Sbjct 10799 AGCTGAAGCCGTGCCGGACCAGGGCCTCGCCCATCTCCTCG---ACGGGGTGTGTGCGGA 10855 Query 448931 AAG----GCCGT-GCCGTCCTGCGGCAAGCCGCTCTCACAGCCCGTGATGGCCTGGAGGG 448985 | | ||||| ||| | || | ||| ||| | | | | ||| | || Sbjct 10856 AGGCGTCGCCGTAGCCATAGCGCTTCTCGCC-CTCGACGACGCTGGCTTTGCCCGTCAGG 10914 Query 448986 C-CTCGAGCAACATGGCGTAGGTCATGCGCGACGGGTAGGCATGCGGGTTCATGATGATG 449044 | ||||| || | || || ||||| || || ||| | | |||||||||||||||||| Sbjct 10915 CACTCGAACAGCTTGCCGACCGTCATTCGGGAGGGGAAACCGTGCGGGTTCATGATGATG 10974 Query 449045 TCGGGCGTCTCGCCGGCCGCGTTGAAGGGCATGTCCTCGGGGTTGACCACCAGGCCGTTG 449104 |||||| | ||| | | | ||| ||||||||||| ||| ||| | | |||| | Sbjct 10975 TCGGGCACCAGGCCTGAGTCCTGGAACGGCATGTCCTCCTGGTCGACGATGATGCCGACG 11034 Query 449105 ACGCCCTTCTGGCCGTGGCGGCTGCAGAACTTGTCCCCCTGCTCGGG 449151 |||||||| ||||||||||| |||||||||| ||| ||||||| Sbjct 11035 ACGCCCTTTTGGCCGTGGCGCGACGAGAACTTGTCGCCCAGCTCGGG 11081 >seq7 Length=1421970 Score = 98.7 bits (108), Expect = 4e-15 Identities = 107/142 (75%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 349074 CGTCGAGAATCTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCGG 349133 ||| |||||| |||||||| | |||| || || || || ||||||| || || || | Sbjct 357812 CGTTGAGAATTTCCTTGAGACGCGGCACACCAAGCGTGACATTCTTGGACGAGATACCCG 357871 Query 349134 CAAAGTGGAAGGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGGCCCGCGA 349193 |||||||| || | ||| |||| |||||| ||||||||||||| |||| | || | Sbjct 357872 TGAAGTGGAACGTGTTGAGCGTCATCTGCGTCGCGGGCTCGCCGATGGACTGCGCGGCCA 357931 Query 349194 GGATGCCTACCATCTCGCCGGG 349215 | | || |||||||||||||| Sbjct 357932 GCACACCAACCATCTCGCCGGG 357953 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084732441536106