Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Falciphora_20oryzae_20[genbank_20GCA_5F000733355.1_202014-07-25] 247 sequences; 50,779,446 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq5 91.5 6e-13 >seq5 Length=1921117 Score = 91.5 bits (100), Expect = 6e-13 Identities = 113/151 (75%), Gaps = 4/151 (3%) Strand=Plus/Plus Query 364427 ATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCGTCA 364486 || ||||||||||| ||||||| | | ||||||||||||||||| ||| ||||| || Sbjct 17607 ATGGTCATACGAGACGGAATGGCGTGGGGGTTGATGATGATGTCTGGCGTGATGCCTTCT 17666 Query 364487 GCGGTAAAGGGCATATCTTCG-GGAGGAACGATGAGACCAATGGTTCCCTTTTGCGCATA 364545 ||||| ||||| || ||| || || ||| | | ||| ||||| ||||| || | | Sbjct 17667 CGCGTAAAAGGCATGTCCTCGTGGCGGTACG-TAACACCGATGGTACCCTTCTGACCGTG 17725 Query 364546 GCGAGAAGCAAACTTGTCGCCAATGACTGGG 364576 || || || |||||||| || || ||||| Sbjct 17726 ACGCGAGGCGAACTTGTCTCCGAT--CTGGG 17754 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884880434923571