Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20asiaticum_20[genbank_20GCA_5F001717835.1_202016-08-31] 353 sequences; 36,384,952 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq9 268 7e-67 seq1 176 4e-39 >seq9 Length=510024 Score = 268 bits (296), Expect = 7e-67 Identities = 1124/1748 (64%), Gaps = 46/1748 (3%) Strand=Plus/Minus Query 65077 ATCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGT 65136 |||||| ||||||||||| | |||||| |||| || | || ||||||||||| || Sbjct 508610 ATCGACGGTGAACTGGATAGGGGCAGCAGCAGCCTGTGTACGGAGGTAGTACATGCCAGT 508551 Query 65137 CTTGAGGCC-AGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAAT-TCGGC 65194 |||||| || ||| ||| || ||| ||||| | || | || |||| | | || Sbjct 508550 CTTGAGACCGAGCTT-CCAGCCAGCGAAGTGCAT-GCTGGTGATCTTGCCCATGGTAGGG 508493 Query 65195 TCGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCC 65254 || || || || || | |||||| |||||| ||| | |||||| || |||||| Sbjct 508492 TCCTTCATGTGAATGTTGAGAGACTGAGACTGATCAATGAAGGCACCACGGTCAGCAGCC 508433 Query 65255 ATGTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGT-ACCTC 65313 || | | | | || || |||||||| || ||||||||||| | | | | ||| Sbjct 508432 ATCTGCACAACCTGTCGCTGAGAAATCTCCCACACAGTCTTGTACAGA-GCCTTGATCTC 508374 Query 65314 AATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCAT 65373 || || | |||| ||||| ||||| | ||||| ||||| || ||| Sbjct 508373 GGCAGGGATGTTGGGGATGTTCTGGATAGAACCGTTATCAGCAATGATGCGGTTCTTCAT 508314 Query 65374 CGACTCTGACCACAAACCCAAATCGATAAGATG-TTGAACCAAGTGACGA-TTGATGACT 65431 | || ||||| | ||||| |||| ||||| |||| ||| | | |||| || Sbjct 508313 AGCATCGGACCAAAGACCCATGTCGACAAGATCCTTGAG--AAGCCAGGGGTTGACAACC 508256 Query 65432 TGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGAT 65491 ||||||||||| | || || || || ||||||||||| ||| || |||||| || Sbjct 508255 TGGAACTCGCCAGCAAGGACTCGGCGTTGGTAGATGTTGGAGGTGTAAGGCTCAAAGCAT 508196 Query 65492 TCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAG 65551 || ||||||| ||||| || | ||| || || ||||| ||||| || | || | Sbjct 508195 TCGTTGTTGCCAAGAATCTGCGAGGTACTGGCGGTAGGCATAGGAGCAACGAGCAGACTG 508136 Query 65552 TTTCGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCACATCGGTTTA 65611 || || | |||| | | | | | || | ||||||| ||| | ||| Sbjct 508135 TTGCGGATACCGTGAGTCTTGACATCCTCTCGGAGGGGTTCCCAGTCCCAAA--GGTCAG 508078 Query 65612 TCGTC--GACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAAC 65669 | | ||||| | ||||| || || || | || | ||| || || | Sbjct 508077 AGGGCTTGACATTC------CACATGTCGAACTGGAGAATACCCTCAGAGGCAGGGGAGC 508024 Query 65670 CGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTG-ACAGCTGGTCTCGAGTGCG 65728 | ||| | ||| || |||||||| || ||||| |||| || | || || Sbjct 508023 CTTTGAAGGTGGAGTAGGGACCTTCCTCCTTAGCGAGTTGCACAGATGTAGTA-AGGGCA 507965 Query 65729 GCAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTAC 65788 || || ||||||||||| || | || || ||||| |||||| ||| | Sbjct 507964 GCGTGGTAGATGGTCTCGAAGATTTGCTTGTTCAGCTCACGAGCCTCAGGAGACTCAAAG 507905 Query 65789 GGCATACCCATCAGGACAA---AAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGA 65845 ||||| | | || ||| | | || || |||||||| || |||| ||| ||||| Sbjct 507904 GGCATGCGGA---GGGCAAGGAAGGCATCAGCAAGACCTTGCACACCAAGACCAATGGGT 507848 Query 65846 CGATGACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATG 65905 || ||||||| ||| | ||||| | |||||||||| |||| ||||| || Sbjct 507847 CGGTGACGCATGTTGCTGTTACGAGCCTCTTGGACAGGGTAGTGGTTGACGTCGATGATC 507788 Query 65906 CGATTCAAATTGCGTGTCACCACATGCACGATA-CGTCGCAATTGTTCGAAATCAAAATG 65964 ||||||||||| || || || || ||| ||| | | ||| || Sbjct 507787 TTGTTCAAATTGCGGACAACAACTTGAGTGACCTCGT-GCAGCTTCTTGAAGTCG----- 507734 Query 65965 TTTAGGACG-ATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGT 66023 ||| | | ||| | | | | | || || | | |||| || || |||| Sbjct 507733 --TAGCAAGCATCTTCATAGTTGATGAA-AGAA----GGCAGAGACAAG-GAGGCAAGGT 507682 Query 66024 TGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGC 66083 |||| ||||| | ||| ||||| ||| || || | || || |||||||| || || Sbjct 507681 TGCAAACAGCGACCTCATCAGGGGCGCAGTATTCAATGATCTCAGTGCACAGGTTGGAGC 507622 Query 66084 AGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCA 66143 || ||||| || | |||| ||| || |||||||||||||| ||||||||| | || Sbjct 507621 TTCGGATGGTACCAAGGTTCTTTTGGTTGCTCTTGCGATTGCAGTGATCCTTGTAGAGCA 507562 Query 66144 TGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCT 66203 || | || | |||||||| |||| ||||| ||||||| |||||| | |||| Sbjct 507561 TGAAAGGGTTTCCGGTCTCTGTCTGGGCCTCAAGAATGGCGTACCAAAGCTTCTGAGCCT 507502 Query 66204 TCACCGTACGTACCGCCCT-ACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGAT 66262 | | | || | | |||| ||| | | ||||| | |||||| || || || Sbjct 507501 TGATAG-ACTTGCGACCCTTACCCTCTCTCTCGTACTTTTCGTACAGAGCCTCAAATTCG 507443 Query 66263 TCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCA 66322 ||||| | || | || | || || | || || ||||| || | ||| || || Sbjct 507442 TCACCGTAGCAGTCAGCAAGGCCAGGGCATTCGTTAGGGCACATGAGAGTCCATTCGCCG 507383 Query 66323 TCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGT 66382 | || ||||| ||| || |||||||| ||||| || || |||| || || || Sbjct 507382 TTTCTCTCGACACGCTTCATGAAAAGATCAGGGATCCAAAGAGCTAAGAACAGGTCACGA 507323 Query 66383 GCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCA 66442 || || |||||| | ||||| || || || | || |||||||| |||| |||||| Sbjct 507322 GCGCGGACCTCCTCCTTACCGTGGTTCTTTCGGAGATCAAGGAACTCGAAGACGTCGGCG 507263 Query 66443 TGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACG 66502 |||||||| || |||||||||||||| | || || ||| ||||| ||||| ||| Sbjct 507262 TGCCATGGCTCAAGGTAGATGGCGAAGGCACCAGGTCGCTTGTTACCACCCTGGTCAACG 507203 Query 66503 TAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTG 66562 || ||||| |||||||| ||||||| ||| || |||| ||||| || | ||||| Sbjct 507202 TAACGAGCAGTGTTGTTGAACACACGCAGCATGGGAACGATACCGTTGGAAGTACCATTA 507143 Query 66563 GTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCG 66622 || ||| ||||| || || || || || ||| | |||| ||||||||||| Sbjct 507142 GTACCGGCGATGTAAGAGCCAGTGGCACGGATTCGGTGGGCGTTCAAGCCAATACCACCA 507083 Query 66623 GCCGTCTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTCA 66682 ||| |||| || || |||||| | || | | || || |||||| ||| Sbjct 507082 GCCATCTTGGAAATCATGGCACAAGTTTTGAGGGTATCGTAGATACCATCAATGCTGTCC 507023 Query 66683 CCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAG 66742 |||| || | ||| ||||||| ||| || || | || || |||| ||| Sbjct 507022 TCCTTCATATCAACAAGGAAGCATGATGAAAGCTGAGGCTGTGGAGTACCGGCGTTGAAT 506963 Query 66743 AGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACA 66802 | ||||| | || || || ||| | | || |||||| ||||| ||||| | |||| Sbjct 506962 AAAGTGGGGCTTGCATGAGTGAAGAACTTGCTTGACATGAGGTTGTATGTCTCCAAGACA 506903 Query 66803 GCATCAAT 66810 ||||| Sbjct 506902 CGCTCAAT 506895 >seq1 Length=1009051 Score = 176 bits (194), Expect = 4e-39 Identities = 368/542 (68%), Gaps = 15/542 (3%) Strand=Plus/Minus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||| ||||| || || ||||||||||| | |||||| ||||| | Sbjct 159655 ATCTGGCAAATGTACAAGAAGGCAGAGGCCTCCTTCTGGACAGCTGAGGAGATCGATCTC 159596 Query 61147 TCCAAAGACATGAATGACTGGGAG---CGTTTATCGAGCGGTGAACAACATTTCATTAAA 61203 ||||| || | | |||||| | || || | | || ||| | ||||| Sbjct 159595 TCCAAGGATCTCCACGACTGGAACAACCGATTGACTTCAGACGAGCAATACTTCATCTCC 159536 Query 61204 CATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGT 61263 || | | || ||||| || || || ||||| ||||||||||||||| | | || || Sbjct 159535 CACATTCTTGCTTTCTTCGCTGCCTCCGACGGCATCGTCAATGAGAATCTTGTTGAGCGA 159476 Query 61264 TTCGCGCAG-GAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCAT 61322 ||| || | ||||| || | | ||||| || || ||||| || |||||||| || Sbjct 159475 TTCA-GCGGCGAGGTCCAGATCCCCGAGGCTCGATGCTTCTATGGTTTCCAGATCATGAT 159417 Query 61323 GGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGC 61382 |||||| ||||||| || | ||| | | ||||||||||| ||||||| ||| | || Sbjct 159416 GGAGAACATCCACTCCGAAACATACTCTCTCCTCATCGATACCTACATCAAGGACCCTGC 159357 Query 61383 GGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAA----G 61438 | ||| | | ||||| ||| | || || || || || | | |||| | Sbjct 159356 CCAGCGTACATACCTCTTCAACGCCGTTGACACTATTCC----TTGCATCCGAAAGAAGG 159301 Query 61439 CGGATTGGGCCTTCAATTGGAT-CACCAGTACAACGGCTACATTTGGTGAACGATTGCTG 61497 ||||||||||| || ||||| || | | ||| |||| |||| | | || | | Sbjct 159300 CGGATTGGGCCATCCGATGGATCCAGGATAAGAAC-TCTACCTTTGCTCAGCGTCTTGTT 159242 Query 61498 GCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTG 61557 || ||||| | || |||||| | || ||||| || | ||||| | ||||| ||| | Sbjct 159241 GCTTTTGCTGCCGTTGAGGGTATCTTCTTCAGCGGTGCCTTTGCTTCCATCTTCTGGCTC 159182 Query 61558 AAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAG 61617 ||||| ||||| || ||||| ||||||| ||| || ||| | || || || || ||| Sbjct 159181 AAGAAGCGTGGCCTCATGCCTGGTCTGAGCTTTTCTAACGAGCTCATTTCTCGTGATGAG 159122 Query 61618 GG 61619 || Sbjct 159121 GG 159120 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397566289587920