Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20avenaceum_20[genbank_20GCA_5F000769215.1_202014-10-10]
83 sequences; 41,590,745 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq41 473 2e-131
>seq41
Length=38872
Score = 473 bits (524), Expect = 2e-131
Identities = 294/314 (94%), Gaps = 1/314 (0%)
Strand=Plus/Plus
Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGA 64
|||||||||||||||||||| |||| ||| || |||||||||||||||||||| ||||||
Sbjct 2443 TGGTCCGGCCGGGCCTTTCCCTCTGTGGAACCCCATGCCCTTCACTGGGTGTGGCGGGGA 2502
Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 124
||||||||||||| |||||||||||||||| || | |||||||| |||||||||||||
Sbjct 2503 AACAGGACTTTTACTGTGAAAAAATTAGAGTGCTCCAGGCAGGCCTATGCTCGAATACAT 2562
Query 125 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 184
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 2563 TAGCATGGAATAATAGAATAGGACGTGTGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 2622
Query 185 AATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 244
||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||
Sbjct 2623 AATGATTAATAGGGACAGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 2682
Query 245 ATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGA 304
||||||||||||||||||||||||||||| || ||||||||||||||||||||||| ||
Sbjct 2683 ATTTATTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAG-GA 2741
Query 305 ACGAAAGTTAGGGG 318
||||||||||||||
Sbjct 2742 ACGAAAGTTAGGGG 2755
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 915199240384
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |