Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20avenaceum_20[genbank_20GCA_5F000769215.1_202014-10-10]
83 sequences; 41,590,745 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq41 717 0.0
>seq41
Length=38872
Score = 717 bits (794), Expect = 0.0
Identities = 563/664 (85%), Gaps = 12/664 (2%)
Strand=Plus/Plus
Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82
||| ||| |||||||||||||||||| |||||||||||| ||||||||||||||||| ||
Sbjct 4084 TGTAAAGTTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAATGGGAGGTATAT 4143
Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4144 GTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 4203
Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202
|||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||
Sbjct 4204 TGAAAAGCACTTTGAAAAGAGAGTTAAAAAGTACGTGAAATTGTTGAAAGGGAAGCGTTT 4263
Query 203 GCAACCAGACTTGCCCGCAGTTGCTCAAC-CGGCCCCTCGGCCGGTGCACTCTTCTGCGG 261
|||||||||| | ||| ||| | || ||| || ||||||| ||| |
Sbjct 4264 ATGACCAGACTTGGACTTGGTTAATCATCTGGGGTTCTC-CCCAGTGCACTTTTC-CAGT 4321
Query 262 TCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGG 321
||||||||||||||| | || | |||||||||| ||||||||| || | |||||||
Sbjct 4322 TCAGGCCAGCATCAGTTTTCGCCGGGGGATAAAGGCTTCGGGAATGTAGCTCTCTTCGGG 4381
Query 322 GGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTG-GACTGAGGTCCGCGCTCCGGCTA 380
| ||||||||||||| ||| ||| | || | | ||||||||| |||||| | || |
Sbjct 4382 GAGTGTTATAGCCCGTTGTGTAATAC--CCTGGTGGAGACTGAGGTTCGCGCTTCTGCAA 4439
Query 381 GGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACA 440
|||||||||||||||||| | | || ||||||||| |||||||||||||||||| |
Sbjct 4440 GGATGCTGGCGTAATGGTCATCAACGACCCGTCTTGAAACACGGACCAAGGAGTC-GTCT 4498
Query 441 TC-TATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGA 499
|| |||||||||||| ||||||||||||| | ||||||||||||||||||| ||||| ||
Sbjct 4499 TCGTATGCGAGTGTTCGGGTGTCAAACCCCTACGCGTAATGAAAGTGAACGCAGGTGAGA 4558
Query 500 ACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCA 559
| || ||| ||||||||||||||||||| |||||||||||||||||||||||
Sbjct 4559 ----GCTTCGGCGCATCATCGACCGATCCTGATGTTCTCGGATGGATTTGAGTAAGAGCA 4614
Query 560 TAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAAC 619
|| | |||||||||||| ||||||||||||||| ||||||||||||||||||||||
Sbjct 4615 TACGGGGCCGGACCCGAAAGAAGGTGAACTATGCCTGTATAGGGTGAAGCCAGAGGAAAC 4674
Query 620 TCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGG 679
|||||||||||||||||||||||||| ||||||||||||||||||||| |||| || |||
Sbjct 4675 TCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATATGGGCATGGGG 4734
Query 680 GCGA 683
||||
Sbjct 4735 GCGA 4738
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079998219650
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |