Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20avenaceum_20[genbank_20GCA_5F000769215.1_202014-10-10]
83 sequences; 41,590,745 total letters
Query= AAMG01000636.1
Length=426
Score E
Sequences producing significant alignments: (Bits) Value
seq83 141 2e-31
>seq83
Length=49075
Score = 141 bits (156), Expect = 2e-31
Identities = 202/279 (72%), Gaps = 8/279 (3%)
Strand=Plus/Minus
Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66
|| |||| |||| |||||| ||| ||||||||||||||| | ||||||||
Sbjct 40104 TAAACTGTATCTGCACAGCTATTCCAATTTCACTGAGTCAATCATAGAGACAGCTGTTGT 40045
Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126
|||||||| ||||| |||| | | | | ||| | | ||||| |||||||||||||||||
Sbjct 40044 ATCGTTACATCATTCATGCAAGACCGCATTTAACGGCCAAGGCATTTCGCTACCTTAGGA 39985
Query 127 CCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGC---TTCGCGT-TAGC 182
|| | | |||| ||||||| || ||||||| ||| || | | | | || ||
Sbjct 39984 CCCTCA-CGTTAAGGCCGCCTTTAACCGGGGTTTCCGTCTACATCAAATATTAGTATATT 39926
Query 183 TAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCA-CTTT 241
|| ||| |||||| |||||||||||||| | |||||| |||||| | | |||
Sbjct 39925 CAATTATATCTGTTAACCAGCCGGCACCGGGCAGACATCACACTCTATACTTAGATTTTT 39866
Query 242 CGTGTTT--GCAGAGTGCTGTGTTTTTAATAAACAGTCG 278
| ||| ||| ||||||||||||| | ||||||||||
Sbjct 39865 AATCTTTCAGCAAAGTGCTGTGTTTTAATTAAACAGTCG 39827
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1260798953536
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |