Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20avenaceum_20[genbank_20GCA_5F000769215.1_202014-10-10]
83 sequences; 41,590,745 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq1 100 5e-19
seq41 84.2 3e-14
>seq1
Length=4337333
Score = 100 bits (110), Expect = 5e-19
Identities = 66/73 (90%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60
||||| |||||| ||||||| |||||||||||| ||||||||||||||||||||||||
Sbjct 1483178 TACTCACTGGCTCTGTCAGTGCCGCGCGCGTGCGGGCCAGAACATCTAAGGGCATCACAG 1483237
Query 61 ACCTGTTATTGCC 73
||||||| |||||
Sbjct 1483238 ACCTGTTGTTGCC 1483250
>seq41
Length=38872
Score = 84.2 bits (92), Expect = 3e-14
Identities = 48/49 (98%), Gaps = 0/49 (0%)
Strand=Plus/Minus
Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAA 49
|||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 3059 TACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAA 3011
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796799359323
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |