Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20avenaceum_20[genbank_20GCA_5F000769215.1_202014-10-10] 83 sequences; 41,590,745 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq1 100 5e-19 seq41 84.2 3e-14 >seq1 Length=4337333 Score = 100 bits (110), Expect = 5e-19 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 ||||| |||||| ||||||| |||||||||||| |||||||||||||||||||||||| Sbjct 1483178 TACTCACTGGCTCTGTCAGTGCCGCGCGCGTGCGGGCCAGAACATCTAAGGGCATCACAG 1483237 Query 61 ACCTGTTATTGCC 73 ||||||| ||||| Sbjct 1483238 ACCTGTTGTTGCC 1483250 >seq41 Length=38872 Score = 84.2 bits (92), Expect = 3e-14 Identities = 48/49 (98%), Gaps = 0/49 (0%) Strand=Plus/Minus Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAA 49 |||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 3059 TACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAA 3011 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796799359323