Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20avenaceum_20[genbank_20GCA_5F000769215.1_202014-10-10] 83 sequences; 41,590,745 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq66 320 1e-82 >seq66 Length=1847925 Score = 320 bits (354), Expect = 1e-82 Identities = 1209/1880 (64%), Gaps = 54/1880 (3%) Strand=Plus/Plus Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137 ||||| ||||||||||| | || || |||| || | ||| ||||||||||| ||| Sbjct 1061212 TCGACAGTGAACTGGATAGGGGCGGCGGCAGCCTGTGTGCGAAGGTAGTACATGCCAGTC 1061271 Query 65138 TTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAAT-TCGGCTC 65196 ||||| ||| ||| | ||| ||||| | || | || |||| | | || || Sbjct 1061272 TTGAGACCAAGCTTCCAGCCGGCGAAGTGCAT-GCTGGTGATCTTGCCCATCGTGGGATC 1061330 Query 65197 GGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCAT 65256 || || || || | ||||| |||||||||| || ||| || || |||||||| Sbjct 1061331 CTTCATGTGAATGTTGAGGGACTGGGACTGATCGATGAAAGCACCTCGGTCGGCAGCCAT 1061390 Query 65257 GTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAG-GC---GACGTACCT 65312 | | | | || || |||||||| || |||||||| || || ||||| | Sbjct 1061391 CTGGACAACCTGGCGCTGAGAAATCTCCCAAACAGTCTTGTAAAGAGCCTTGACGT-CGG 1061449 Query 65313 CAATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCA 65372 || || || | |||| ||| | ||||| | | |||||| || || || Sbjct 1061450 CA---GGGATGTTGGGGATGTTCTGAATAGAACCGTTATCGGAAATAATACGGTTCTTCA 1061506 Query 65373 TCGACTCTGACCACAAACCCAAATCGATAAGATG-TTGA---ACCAAGTGACGATTGATG 65428 | | || |||||||| |||| |||| ||||| |||| |||| | | |||| Sbjct 1061507 TGGCATCAGACCACAAGCCCATGTCGACAAGATCCTTGAGCAACCAGGGG----TTGACA 1061562 Query 65429 ACTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAG 65488 || |||||||| || | || || || || || |||||||| ||| || || ||| Sbjct 1061563 ACCTGGAACTCACCAGCAAGGACTCGGCGCTGGTAAATGTTGGAGGTGTAAGGCTCGAAG 1061622 Query 65489 GATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAAT 65548 | || |||| || ||||| || | ||| ||||| ||||| || || | | || Sbjct 1061623 CACTCGTTGTTACCCAGAATCTGCGAGGTACTGGCAGTAGGCATAGGGGCAAGGAGCAGA 1061682 Query 65549 GAGTTTCGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCACATCGGT 65608 ||| || | |||| | | || | | || | ||||||| ||| | ||| Sbjct 1061683 CTGTTACGGATACCGTGAGTCTTAACATCCTCTCGAAGGCTCTCCCAGTCCCAAA--GGT 1061740 Query 65609 TTATCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAA 65668 | | | ||| |||||| || || ||| | || | ||| || ||| Sbjct 1061741 CGGAAGGC----TTGACGTTCCACATGTCGAACTGGAGGATACCCTCAGAGGCGGGAGAA 1061796 Query 65669 CCGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTCGAGTGCG 65728 || ||| || ||| |||||||||||||| | || | || ||| || Sbjct 1061797 CCCTTGAAGGTAGAGTAGGGACCCTCCTCCTTGGCCAACTGCACGGAGGCAGTGAGGGCA 1061856 Query 65729 GCAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTAC 65788 || || |||||||| || || | || || || | ||||| |||| | Sbjct 1061857 GCGTGGTAGATGGTCTCAAAGATCTGCTTGTTGAGCTCTCTAGCCTCTGGAGACTCGAAG 1061916 Query 65789 GGCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGA 65848 ||||| | || | |||| || || ||||| || || |||| |||||| || || Sbjct 1061917 GGCATGCGCAGAGCAAGGAAAGCATCAGCAAGACCCTGTACACCAAGACCGATAGGTCGG 1061976 Query 65849 TGACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGA 65908 ||||||| ||| | ||||| | |||||||||| |||| |||||| || Sbjct 1061977 TGACGCATGTTGCTGTTGCGAGCCTCTTGCACAGGGTAGTGGTTGACATCGATGATCTTG 1062036 Query 65909 TTCAAATTGCGTGTCACCACATGCACGATACGTCGCAATTGTTCGAAATCAAAATGTTTA 65968 ||||| ||||| || || || || | ||| | | ||||||| || Sbjct 1062037 TTCAAGTTGCGGACAACAACCTGACTGACCTGATGCAGCTTCTTGAAATCA-------TA 1062089 Query 65969 GGACG----ATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTT 66024 | | | ||| ||| || | || || |||||||| || || ||||| Sbjct 1062090 GCAAGCCTCATCAT-AGTTGATGAAAGCA--------GGCAGGGCAAGGGAGGCAAGGTT 1062140 Query 66025 GCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCA 66084 ||| ||||| | ||| ||||| || ||||||| || || |||||||||||| || Sbjct 1062141 GCAAACAGCGACCTCATCAGGGGCACAGTACTCGATGATCTCAGTGCACAGATTAGAGCT 1062200 Query 66085 GCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCAT 66144 || |||||||| | |||| || || |||||||| || || ||||||||||| | ||| Sbjct 1062201 TCGGATGGTGCCGAGGTTCTTCTGGTTGCTCTTGCGGTTACAGGCATCCTTGTAAAGCAT 1062260 Query 66145 GTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTT 66204 | | || | |||||||| |||| ||| | |||||| | |||||| | ||||| Sbjct 1062261 GAAGGGGTTTCCGGTCTCGGTCTGGGCCTCGAGGATGGCATACCAAAGCTTCTGGGCCTT 1062320 Query 66205 CACCGTACGTACCGCCCT-ACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATT 66263 | | || | | |||| ||||| | ||||| | ||||||||| || || || Sbjct 1062321 GATGG-ACTTGCGACCCTTACCTTCCCTCTCGTACTTCTCGTAGAGGGCCTCAAACTCTT 1062379 Query 66264 CACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCAT 66323 |||| | |||| |||| || |||| || || ||||| || | ||| || || | Sbjct 1062380 CACCGTAGCAGTCGGCAAGACCAGGGCACTCGTTGGGGCACATGAGGGTCCACTCTCCGT 1062439 Query 66324 CCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTG 66383 || || ||||| ||| || || ||||| ||||||||||| ||| || ||||| | Sbjct 1062440 TCTTCTCAACACGCTTCATGAAAAGGTCAGGGATCCAGAGGGCCAGGAACAGGTCGCGGG 1062499 Query 66384 CTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCAT 66443 | || |||||| | ||||| || || || | || |||||||| |||| || || | Sbjct 1062500 CGCGGACCTCCTCCTTACCGTGGTTCTTTCGGAGATCAAGGAACTCGAAGACATCAGCGT 1062559 Query 66444 GCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGT 66503 |||| || || |||||||| || || | || || ||| ||||| || || |||| Sbjct 1062560 GCCAAGGCTCAAGGTAGATAGCAAAAGCACCAGGTCGCTTGTTACCACCCTGATCAACGT 1062619 Query 66504 AGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGG 66563 |||| || |||||||||||||| | ||| || || | ||||| ||| | || |||| Sbjct 1062620 AGCGGGCAGTGTTGTTGAAGACACGTAGCATAGGAACAACACCGTTGGATGTACCGTTGG 1062679 Query 66564 TGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGG 66623 | || | ||| ||| || || || || ||| |||| |||||||||||||| | Sbjct 1062680 TACCAGCAATGTAGGAGCCAGTGGCACGGATTCGGTGGGCATTGAGACCAATACCACCAG 1062739 Query 66624 CCGTCTTCGAGATGGCAGCACAATCGGCC---ACTGTCCGGAATATGCCGTCAATGGAGT 66680 || |||| || || ||||| || | | || | || ||||||||| || Sbjct 1062740 CCATCTTGGAAATCATGGCACA---GGTCTTGAGGGTATCATAGATACCGTCAATGCTGT 1062796 Query 66681 CACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGA 66740 | |||| || | | | |||||||| ||| ||||||| || || | || || Sbjct 1062797 CCTCCTTCATATCAACCAAGAAGCATGAAGAAAGCTGGGGTTGAGGGGTACCAGCGTTGA 1062856 Query 66741 AGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGA 66800 |||||||||| | ||| || || ||| | | || |||||| ||||| ||||| | || Sbjct 1062857 AGAGGGTGGGGGAAGCATGGGTGAAGAACTTGCTGGACATGAGGTTGTATGTCTCCAAGA 1062916 Query 66801 CAGCATCAATGTTTTCGCCATGAATCCCGAGTG-CACATCGCATCAGGAGGTATTGAGGC 66859 || ||||| | ||||| || || | | |||| ||||| | | || ||||| Sbjct 1062917 CACGCTCAATATCATCGCCCCATATACCAATAGACACA-CGCATGATCATGTGCTGAGGA 1062975 Query 66860 CGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCA 66919 |||||||| | | | | || | | | ||| || || |||| ||||||| ||| Sbjct 1062976 CGTTCGACAATCTTGCCGTCAATCTTGAGGAGGTATGATCGCTCCAATGTCTTGAAGCCA 1063035 Query 66920 AAGTACGAGTAATTGAAATC 66939 ||||| ||| | |||||| Sbjct 1063036 AAGTATTGGTATTGGAAATC 1063055 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567597835120