Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20avenaceum_20[genbank_20GCA_5F000769295.1_202014-10-10]
78 sequences; 43,168,069 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq8 367 2e-99
seq33 100 5e-19
>seq8
Length=7975
Score = 367 bits (406), Expect = 2e-99
Identities = 239/259 (92%), Gaps = 3/259 (1%)
Strand=Plus/Minus
Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3243 TACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 3184
Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120
||||||||||||||||||||||||| |||| || ||| ||||||||||||||||||||||
Sbjct 3183 ACCTGTTATTGCCTCAAACTTCCATCGGCTTGA-GCCGATAGTCCCTCTAAGAAGCCAGC 3125
Query 121 CACCAACCATAGTCGATG-GGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179
| ||| || | || |||||||||||||||||||||||||||||||||||| ||||
Sbjct 3124 GTACTGCCAAAG-CAATACGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGCAATT 3066
Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239
|| ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||
Sbjct 3065 AAGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAAG 3006
Query 240 AAAGAGCTATCAATCTGTC 258
|||||||| ||||||||||
Sbjct 3005 AAAGAGCTCTCAATCTGTC 2987
>seq33
Length=5643559
Score = 100 bits (110), Expect = 5e-19
Identities = 69/78 (88%), Gaps = 0/78 (0%)
Strand=Plus/Plus
Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60
||||| |||||||||||||| |||||||||||| |||||||||||||||||| |||||
Sbjct 2019157 TACTCACTGGCTCCGTCAGTGCCGCGCGCGTGCGGGCCAGAACATCTAAGGGCACCACAG 2019216
Query 61 ACCTGTTATTGCCTCAAA 78
|||| || ||||||| ||
Sbjct 2019217 ACCTCTTGTTGCCTCGAA 2019234
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796799397918
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |