Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20avenaceum_20[genbank_20GCA_5F000769295.1_202014-10-10] 78 sequences; 43,168,069 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq73 320 1e-82 >seq73 Length=2503951 Score = 320 bits (354), Expect = 1e-82 Identities = 1209/1880 (64%), Gaps = 54/1880 (3%) Strand=Plus/Plus Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137 ||||| ||||||||||| | || || |||| || | ||| ||||||||||| ||| Sbjct 1795458 TCGACAGTGAACTGGATAGGGGCGGCGGCAGCCTGTGTGCGAAGGTAGTACATGCCAGTC 1795517 Query 65138 TTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAAT-TCGGCTC 65196 ||||| ||| ||| | ||| ||||| | || | || |||| | | || || Sbjct 1795518 TTGAGACCAAGCTTCCAGCCGGCGAAGTGCAT-GCTGGTGATCTTGCCCATCGTGGGATC 1795576 Query 65197 GGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCAT 65256 || || || || | ||||| |||||||||| || ||| || || |||||||| Sbjct 1795577 CTTCATGTGAATGTTGAGGGACTGGGACTGATCGATGAAAGCACCTCGGTCGGCAGCCAT 1795636 Query 65257 GTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAG-GC---GACGTACCT 65312 | | | | || || |||||||| || |||||||| || || ||||| | Sbjct 1795637 CTGGACAACCTGGCGCTGAGAAATCTCCCAAACAGTCTTGTAAAGAGCCTTGACGT-CGG 1795695 Query 65313 CAATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCA 65372 || || || | |||| ||| | ||||| | | |||||| || || || Sbjct 1795696 CA---GGGATGTTGGGGATGTTCTGAATAGAACCGTTATCGGAAATAATACGGTTCTTCA 1795752 Query 65373 TCGACTCTGACCACAAACCCAAATCGATAAGATG-TTGA---ACCAAGTGACGATTGATG 65428 | | || |||||||| |||| |||| ||||| |||| |||| | | |||| Sbjct 1795753 TGGCATCAGACCACAAGCCCATGTCGACAAGATCCTTGAGCAACCAGGGG----TTGACA 1795808 Query 65429 ACTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAG 65488 || |||||||| || | || || || || || |||||||| ||| || || ||| Sbjct 1795809 ACCTGGAACTCACCAGCAAGGACTCGGCGCTGGTAAATGTTGGAGGTGTAAGGCTCGAAG 1795868 Query 65489 GATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAAT 65548 | || ||||||| ||||| || | ||| ||||| ||||| || || | | || Sbjct 1795869 CACTCGTTGTTGCCCAGAATCTGCGAGGTACTGGCAGTAGGCATAGGGGCAAGGAGCAGA 1795928 Query 65549 GAGTTTCGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCACATCGGT 65608 ||| || | ||||| | | || | | || | ||||||| ||| | ||| Sbjct 1795929 CTGTTACGGATACCGTTAGTCTTAACATCCTCTCGAAGGCTCTCCCAGTCCCAAA--GGT 1795986 Query 65609 TTATCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAA 65668 | | | ||| |||||| || || ||| | || | ||| || ||| Sbjct 1795987 CGGAAGGC----TTGACGTTCCACATGTCGAACTGGAGGATACCCTCAGAGGCGGGAGAA 1796042 Query 65669 CCGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTCGAGTGCG 65728 || ||| || ||| |||||||||||||| | || | || ||| || Sbjct 1796043 CCCTTGAAGGTAGAGTAGGGACCCTCCTCCTTGGCCAACTGCACGGAGGCAGTGAGGGCA 1796102 Query 65729 GCAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTAC 65788 || || |||||||| || || | || || || | ||||| |||| | Sbjct 1796103 GCGTGGTAGATGGTCTCAAAGATCTGCTTGTTGAGCTCTCTAGCCTCTGGAGACTCGAAG 1796162 Query 65789 GGCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGA 65848 ||||| | || | |||| || || ||||| || || |||| |||||| || || Sbjct 1796163 GGCATGCGCAGAGCAAGGAAAGCATCAGCAAGACCCTGTACACCAAGACCGATAGGTCGG 1796222 Query 65849 TGACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGA 65908 ||||||| ||| | ||||| | |||||||||| |||| |||||| || Sbjct 1796223 TGACGCATGTTGCTGTTGCGAGCCTCTTGCACAGGGTAGTGGTTGACATCGATGATCTTG 1796282 Query 65909 TTCAAATTGCGTGTCACCACATGCACGATACGTCGCAATTGTTCGAAATCAAAATGTTTA 65968 ||||| ||||| || || || || | ||| | | ||||||| || Sbjct 1796283 TTCAAGTTGCGGACAACAACCTGACTGACCTGATGCAGCTTCTTGAAATCA-------TA 1796335 Query 65969 GGACG----ATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTT 66024 | | | ||| ||| || | || || |||||||| || || ||||| Sbjct 1796336 GCAAGCCTCATCAT-AGTTGATGAAAGCA--------GGCAGGGCAAGGGAGGCAAGGTT 1796386 Query 66025 GCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCA 66084 ||| ||||| | ||| ||||| || ||||||| || || |||||||||||| || Sbjct 1796387 GCAAACAGCGACCTCATCAGGGGCACAGTACTCGATGATCTCAGTGCACAGATTAGAGCT 1796446 Query 66085 GCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCAT 66144 || |||||||| | |||| || || |||||||| || || ||||||||||| | ||| Sbjct 1796447 TCGGATGGTGCCGAGGTTCTTCTGGTTGCTCTTGCGGTTACAGGCATCCTTGTAAAGCAT 1796506 Query 66145 GTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTT 66204 | | || | |||||||| |||| ||| | |||||| | |||||| | ||||| Sbjct 1796507 GAAGGGGTTTCCGGTCTCGGTCTGGGCCTCGAGGATGGCATACCAAAGCTTCTGGGCCTT 1796566 Query 66205 CACCGTACGTACCGCCCT-ACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATT 66263 | | || | | |||| ||||| | ||||| | ||||||||| || || || Sbjct 1796567 GATGG-ACTTGCGACCCTTACCTTCCCTCTCGTACTTCTCGTAGAGGGCCTCAAACTCTT 1796625 Query 66264 CACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCAT 66323 |||| | |||| |||| || |||| || || ||||| || | ||| || || | Sbjct 1796626 CACCGTAGCAGTCGGCAAGACCAGGGCACTCGTTGGGGCACATGAGGGTCCACTCTCCGT 1796685 Query 66324 CCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTG 66383 || || ||||| ||| || || ||||| ||||||||||| ||| || ||||| | Sbjct 1796686 TCTTCTCAACACGCTTCATGAAAAGGTCAGGGATCCAGAGGGCCAGGAACAGGTCGCGGG 1796745 Query 66384 CTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCAT 66443 | || |||||| | ||||| || || || | || ||||||||||||| || || | Sbjct 1796746 CGCGGACCTCCTCCTTACCGTGGTTCTTTCGGAGATCAAGGAACTCAAAGACATCAGCGT 1796805 Query 66444 GCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGT 66503 |||| || || |||||||| || || | || || ||| ||||| || || |||| Sbjct 1796806 GCCAAGGCTCAAGGTAGATAGCAAAAGCACCAGGTCGCTTGTTACCACCCTGATCAACGT 1796865 Query 66504 AGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGG 66563 |||| || |||||||||||||| | ||| || || | ||||| ||| | || |||| Sbjct 1796866 AGCGGGCAGTGTTGTTGAAGACACGTAGCATAGGAACAACACCGTTGGATGTACCGTTGG 1796925 Query 66564 TGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGG 66623 | || | ||| ||| || || || || ||| |||| |||||||||||||| | Sbjct 1796926 TACCAGCAATGTAGGAGCCAGTGGCACGGATTCGGTGGGCATTGAGACCAATACCACCAG 1796985 Query 66624 CCGTCTTCGAGATGGCAGCACAATCGGCC---ACTGTCCGGAATATGCCGTCAATGGAGT 66680 || |||| || || ||||| || | | || | || ||||||||| || Sbjct 1796986 CCATCTTGGAAATCATGGCACA---GGTCTTGAGGGTATCATAGATACCGTCAATGCTGT 1797042 Query 66681 CACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGA 66740 | |||| || | | | ||||||| ||| ||||||| || || | || || Sbjct 1797043 CCTCCTTCATATCAACCAAGAAGCATGAGGAAAGCTGGGGTTGAGGGGTACCAGCGTTGA 1797102 Query 66741 AGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGA 66800 |||||||||| | ||| || || ||| | | || ||||| ||||| ||||| | || Sbjct 1797103 AGAGGGTGGGGGAAGCATGGGTGAAGAACTTGCTGGACATAAGGTTGTATGTCTCCAAGA 1797162 Query 66801 CAGCATCAATGTTTTCGCCATGAATCCCGAGTG-CACATCGCATCAGGAGGTATTGAGGC 66859 || ||||| | || || || || | | |||| ||||| | | || ||||| Sbjct 1797163 CACGCTCAATATCATCACCCCATATACCAATAGACACA-CGCATGATCATGTGCTGAGGA 1797221 Query 66860 CGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCA 66919 |||||||| | | | | || | | | ||| || || |||| ||||||| ||| Sbjct 1797222 CGTTCGACAATCTTGCCGTCAATCTTGAGGAGGTATGATCGCTCCAACGTCTTGAAGCCA 1797281 Query 66920 AAGTACGAGTAATTGAAATC 66939 ||||| ||| | |||||| Sbjct 1797282 AAGTATTGGTATTGGAAATC 1797301 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567622061920