Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20avenaceum_20[genbank_20GCA_5F000769305.1_202014-10-10] 105 sequences; 42,707,783 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq19 279 8e-73 seq1 114 2e-23 seq96 93.3 6e-17 >seq19 Length=7974 Score = 279 bits (308), Expect = 8e-73 Identities = 202/229 (88%), Gaps = 5/229 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| |||| ||||||| |||||||||||| ||| | Sbjct 4944 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGGATT-C 4887 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||| ||||| | | ||| | |||||| Sbjct 4886 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACGGAGTTTAACAAGATT 4827 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||||||||| |||| ||||| || |||| || | | ||||||||||||||||||| Sbjct 4826 ACCCGGACCTTTCGGACAAGGAAGTA--CTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCG 4769 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4768 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 4720 >seq1 Length=1290987 Score = 114 bits (126), Expect = 2e-23 Identities = 130/172 (76%), Gaps = 3/172 (2%) Strand=Plus/Minus Query 58 TTCCTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAG 116 |||||||||||||| ||| || ||||||| ||||||||| ||| || | | ||| | ||| Sbjct 853395 TTCCTCGTTGAAGAGCAATAACTGCAATGCTCTATCCCCTTCATGACGGAGTTTAACAAG 853336 Query 117 ATTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGT 176 ||||||||||||| |||| || | | | ||| | | || | || | ||| Sbjct 853335 ATTACCCGGACCTTTCGGATAAAGAAGTCG--CCGTCAAGCCCGCCATTCCAGTGTTCGT 853278 Query 177 GCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 || || ||||||| ||||||||| |||||||||||||||| ||||||||| Sbjct 853277 GCTGCTCAGAACACACAAGGGCATCGCAGACCTGTTATTGCCACAAACTTCC 853226 >seq96 Length=4151235 Score = 93.3 bits (102), Expect = 6e-17 Identities = 87/110 (79%), Gaps = 2/110 (2%) Strand=Plus/Plus Query 114 AAGATTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCG 173 ||||||| || ||||| | || || |||| |||| || | | |||||| ||||| Sbjct 528184 AAGATTAGCCAGACCTTTTGGACA--GTGAAGTACTCACTGGCTCCGTCAGTGCCGCGCG 528241 Query 174 CGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAA 223 ||||||| |||||||||||||||||| ||||||||| || ||||||| || Sbjct 528242 CGTGCGGGCCAGAACATCTAAGGGCACCACAGACCTCTTGTTGCCTCGAA 528291 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751999235075