Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20avenaceum_20[genbank_20GCA_5F000769305.1_202014-10-10] 105 sequences; 42,707,783 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq19 717 0.0 seq102 170 8e-40 seq12 82.4 3e-13 >seq19 Length=7974 Score = 717 bits (794), Expect = 0.0 Identities = 563/664 (85%), Gaps = 12/664 (2%) Strand=Plus/Plus Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82 ||| ||| |||||||||||||||||| |||||||||||| ||||||||||||||||| || Sbjct 5827 TGTAAAGTTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAATGGGAGGTATAT 5886 Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5887 GTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 5946 Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202 |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| || Sbjct 5947 TGAAAAGCACTTTGAAAAGAGAGTTAAAAAGTACGTGAAATTGTTGAAAGGGAAGCGTTT 6006 Query 203 GCAACCAGACTTGCCCGCAGTTGCTCAAC-CGGCCCCTCGGCCGGTGCACTCTTCTGCGG 261 |||||||||| | ||| ||| | || ||| || ||||||| ||| | Sbjct 6007 ATGACCAGACTTGGACTTGGTTAATCATCTGGGGTTCTC-CCCAGTGCACTTTTC-CAGT 6064 Query 262 TCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGG 321 ||||||||||||||| | || | |||||||||| ||||||||| || | ||||||| Sbjct 6065 TCAGGCCAGCATCAGTTTTCGCCGGGGGATAAAGGCTTCGGGAATGTAGCTCTCTTCGGG 6124 Query 322 GGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTG-GACTGAGGTCCGCGCTCCGGCTA 380 | ||||||||||||| ||| ||| | || | | ||||||||| |||||| | || | Sbjct 6125 GAGTGTTATAGCCCGTTGTGTAATAC--CCTGGTGGAGACTGAGGTTCGCGCTTCTGCAA 6182 Query 381 GGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACA 440 |||||||||||||||||| | | || ||||||||| |||||||||||||||||| | Sbjct 6183 GGATGCTGGCGTAATGGTCATCAACGACCCGTCTTGAAACACGGACCAAGGAGTC-GTCT 6241 Query 441 TC-TATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGA 499 || |||||||||||| ||||||||||||| | ||||||||||||||||||| ||||| || Sbjct 6242 TCGTATGCGAGTGTTCGGGTGTCAAACCCCTACGCGTAATGAAAGTGAACGCAGGTGAGA 6301 Query 500 ACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCA 559 | || ||| ||||||||||||||||||| ||||||||||||||||||||||| Sbjct 6302 ----GCTTCGGCGCATCATCGACCGATCCTGATGTTCTCGGATGGATTTGAGTAAGAGCA 6357 Query 560 TAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAAC 619 || | |||||||||||| ||||||||||||||| |||||||||||||||||||||| Sbjct 6358 TACGGGGCCGGACCCGAAAGAAGGTGAACTATGCCTGTATAGGGTGAAGCCAGAGGAAAC 6417 Query 620 TCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGG 679 |||||||||||||||||||||||||| ||||||||||||||||||||| |||| || ||| Sbjct 6418 TCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATATGGGCATGGGG 6477 Query 680 GCGA 683 |||| Sbjct 6478 GCGA 6481 >seq102 Length=523 Score = 170 bits (188), Expect = 8e-40 Identities = 132/157 (84%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 527 CCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGA 586 |||||| | | || || || |||| |||||| |||| ||||||||||||||||||| Sbjct 3 CCTGATCTTCTGAGAAGGGTTCGAGTGGGAGCATGCCTGTCGGGACCCGAAAGATGGTGA 62 Query 587 ACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGG 646 ||||||||||| ||| ||||||||||||||||||||||||||| ||||||| | ||| Sbjct 63 ACTATGCCTGAGCGGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCCCGCAGCGATACTGA 122 Query 647 CGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||||||||||| ||||| | |||||||||||||||| Sbjct 123 CGTGCAAATCGTTCGTCTGACTTGGGTATAGGGGCGA 159 >seq12 Length=271 Score = 82.4 bits (90), Expect = 3e-13 Identities = 109/148 (74%), Gaps = 5/148 (3%) Strand=Plus/Minus Query 405 CGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTG-TCA 463 || ||||||||| ||||||||||||||||||| |||| | ||||||| ||||| | Sbjct 145 CGACCCGTCTTGAAACACGGACCAAGGAGTCTGACATGTGTGCGAGTCAACGGGTGAGTA 86 Query 464 AACCCGT-GCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGAC 522 ||||||| ||| || ||| ||| ||||||| ||| | ||||||||| |||| Sbjct 85 AACCCGTAAAGCGCAAGGAAGCTGA---TTGGTGGGATCCCTCGCGGGTGCACCGCCGAC 29 Query 523 CGATCCTGATGTCTTCGGATGGATTTGA 550 ||| | |||| | || || || || || Sbjct 28 CGACCTTGATCTTTTGAGAAGGGTTCGA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079997747750