Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20avenaceum_20[genbank_20GCA_5F000769305.1_202014-10-10] 105 sequences; 42,707,783 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq19 493 2e-137 seq7 313 4e-83 seq6 201 2e-49 >seq19 Length=7974 Score = 493 bits (546), Expect = 2e-137 Identities = 287/295 (97%), Gaps = 1/295 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 |||||||| |||||||||||| || || |||||||||||||||||||||||||||||||| Sbjct 593 TACTAAGCTGAATTACCATTGCGGTGA-GGTCATCAGTAGGGTAAAACTAACCTGTCTCA 535 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 534 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 475 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 474 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTAT 415 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 414 GAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 355 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 354 CAAATGTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 300 >seq7 Length=213 Score = 313 bits (346), Expect = 4e-83 Identities = 188/198 (95%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 28 CGGTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCC 87 ||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 198 CGGGCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCC 139 Query 88 CTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGC 147 ||||| |||||||||||||||||| ||| |||||||||||| |||||||||||||| Sbjct 138 CTATTGGTGGGTGAACAATCCAACACTTGGTGAATTCTGCTTCACAATGATAGGAAGAGC 79 Query 148 CGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTA 207 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 78 CGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTA 19 Query 208 TCCCTGTGGTAACTTTTC 225 |||||||||||||||||| Sbjct 18 TCCCTGTGGTAACTTTTC 1 >seq6 Length=215 Score = 201 bits (222), Expect = 2e-49 Identities = 123/131 (94%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 163 AAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTT 222 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 215 AAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTT 156 Query 223 TTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCAT 282 ||||| |||||||||| ||||||| ||| || |||||||||||||||||||| |||||| Sbjct 155 TTCTGACACCTCTAGCTTCAAATTCCGAAGGTCTAAAGGATCGATAGGCCACGCTTTCAC 96 Query 283 GGTTTGTATTC 293 |||| |||||| Sbjct 95 GGTTCGTATTC 85 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854399102880