Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20avenaceum_20[genbank_20GCA_5F000769305.1_202014-10-10]
105 sequences; 42,707,783 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq19 493 2e-137
seq7 313 4e-83
seq6 201 2e-49
>seq19
Length=7974
Score = 493 bits (546), Expect = 2e-137
Identities = 287/295 (97%), Gaps = 1/295 (0%)
Strand=Plus/Minus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
|||||||| |||||||||||| || || ||||||||||||||||||||||||||||||||
Sbjct 593 TACTAAGCTGAATTACCATTGCGGTGA-GGTCATCAGTAGGGTAAAACTAACCTGTCTCA 535
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 534 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 475
Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 474 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTAT 415
Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 414 GAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 355
Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295
||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 354 CAAATGTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 300
>seq7
Length=213
Score = 313 bits (346), Expect = 4e-83
Identities = 188/198 (95%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 28 CGGTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCC 87
||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 198 CGGGCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCC 139
Query 88 CTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGC 147
||||| |||||||||||||||||| ||| |||||||||||| ||||||||||||||
Sbjct 138 CTATTGGTGGGTGAACAATCCAACACTTGGTGAATTCTGCTTCACAATGATAGGAAGAGC 79
Query 148 CGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTA 207
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 78 CGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTA 19
Query 208 TCCCTGTGGTAACTTTTC 225
||||||||||||||||||
Sbjct 18 TCCCTGTGGTAACTTTTC 1
>seq6
Length=215
Score = 201 bits (222), Expect = 2e-49
Identities = 123/131 (94%), Gaps = 0/131 (0%)
Strand=Plus/Minus
Query 163 AAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTT 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 215 AAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTT 156
Query 223 TTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCAT 282
||||| |||||||||| ||||||| ||| || |||||||||||||||||||| ||||||
Sbjct 155 TTCTGACACCTCTAGCTTCAAATTCCGAAGGTCTAAAGGATCGATAGGCCACGCTTTCAC 96
Query 283 GGTTTGTATTC 293
|||| ||||||
Sbjct 95 GGTTCGTATTC 85
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854399102880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |