Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20avenaceum_20[genbank_20GCA_5F000769305.1_202014-10-10]
105 sequences; 42,707,783 total letters
Query= AAMG01001634.1
Length=217
Score E
Sequences producing significant alignments: (Bits) Value
seq19 159 4e-37
seq4 75.2 1e-11
>seq19
Length=7974
Score = 159 bits (176), Expect = 4e-37
Identities = 152/192 (79%), Gaps = 2/192 (1%)
Strand=Plus/Minus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct 4159 CTAGAAACCAACAAAATAGAACCACACGTCCTATTCTATTATTCCATGCTAATGTATTCG 4100
Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125
|| || |||||| | || |||||||||||| ||| |||||||||||| |||| | ||
Sbjct 4099 AGCATAGGCCTGCCTGGAGCACTCTAATTTTTTCACAGTAAAAGTCCTGTTTCCCCGCCA 4040
Query 126 CA-CCAATGAA-GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTACTCGCC 183
|| ||| |||| ||||| || ||| || | ||| | || |||||| |||
Sbjct 4039 CACCCAGTGAAGGGCATGGGGTTCCACAGAGGGAAAGGCCCGGCCGGACCAGTACACGCG 3980
Query 184 GTGAGGCGGACC 195
||||||||||||
Sbjct 3979 GTGAGGCGGACC 3968
>seq4
Length=251
Score = 75.2 bits (82), Expect = 1e-11
Identities = 77/98 (79%), Gaps = 2/98 (2%)
Strand=Plus/Plus
Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71
|||||| || ||| || | |||||| | |||| |||||||||||||| | | |||||
Sbjct 66 CCAACATAAAAGGATCGAAA-TCCTATGATGTTATCCCATGCTAATGTATCCAGAGCGTA 124
Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109
|| |||||||| ||||||||||| |||| |||| ||
Sbjct 125 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 162
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595199394570
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |