Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20avenaceum_20[genbank_20GCA_5F000769305.1_202014-10-10] 105 sequences; 42,707,783 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq19 462 7e-128 >seq19 Length=7974 Score = 462 bits (512), Expect = 7e-128 Identities = 261/264 (99%), Gaps = 0/264 (0%) Strand=Plus/Minus Query 280 ACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTT 339 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 7974 ACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTT 7915 Query 340 GGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGC 399 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 7914 GGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGC 7855 Query 400 GCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGC 459 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 7854 GCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGC 7795 Query 460 CGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATC 519 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 7794 CGTTTACCCGCGCTTGGTTGAATTACTTCACTTTGACATTCAGAGCACTGGGCAGAAATC 7735 Query 520 ACATTGCGTCAACATCACTTTCTG 543 |||||||||||||| ||||||||| Sbjct 7734 ACATTGCGTCAACACCACTTTCTG 7711 Score = 340 bits (376), Expect = 6e-91 Identities = 239/271 (88%), Gaps = 5/271 (2%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| ||||| |||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 268 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACACCTGCGTTATG 209 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || Sbjct 208 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGGTC 149 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186 ||||||||||||||||||| |||||| ||| || || |||| |||||||||||| Sbjct 148 GGCCCGCGAAGGACCTTAAAACCAGAAGTTGGACG--TAAATCCAGCCCCGCTTCATTGA 91 Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246 ||||||||||||| ||| | ||||||||||||||| |||||||| |||||||| || Sbjct 90 ATAAGTAAAAAAACAATAGGAGTAGTGGTATTTCACCGGCGCCGAA---GCTCCCACCTA 34 Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTC 277 ||||||||||| | ||| |||||||| ||| Sbjct 33 TTCTACACCTCCTATGTCTTTTCACAATGTC 3 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635198283040