Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20azukicola_20[genbank_20GCA_5F001680625.1_202016-07-06] 32,428 sequences; 51,307,981 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq5 473 2e-131 seq3954 233 4e-59 >seq5 Length=7701 Score = 473 bits (524), Expect = 2e-131 Identities = 294/314 (94%), Gaps = 1/314 (0%) Strand=Plus/Plus Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGA 64 |||||||||||||||||||| |||| ||| || |||||||||||||||||||| |||||| Sbjct 6401 TGGTCCGGCCGGGCCTTTCCCTCTGTGGAACCCCATGCCCTTCACTGGGTGTGGCGGGGA 6460 Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 124 ||||||||||||| |||||||||||||||| || | |||||||| ||||||||||||| Sbjct 6461 AACAGGACTTTTACTGTGAAAAAATTAGAGTGCTCCAGGCAGGCCTATGCTCGAATACAT 6520 Query 125 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 184 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 6521 TAGCATGGAATAATAGAATAGGACGTGTGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 6580 Query 185 AATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 244 ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| Sbjct 6581 AATGATTAATAGGGACAGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 6640 Query 245 ATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGA 304 ||||||||||||||||||||||||||||| || ||||||||||||||||||||||| || Sbjct 6641 ATTTATTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAG-GA 6699 Query 305 ACGAAAGTTAGGGG 318 |||||||||||||| Sbjct 6700 ACGAAAGTTAGGGG 6713 >seq3954 Length=1237 Score = 233 bits (258), Expect = 4e-59 Identities = 203/248 (82%), Gaps = 3/248 (1%) Strand=Plus/Plus Query 72 CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCAT 130 || |||||||||| ||||||||||| |||||||| |||| |||| | |||||||||||| Sbjct 758 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCAT 817 Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190 || |||| | |||||| | |||| ||||| ||||| | ||| || |||||||| Sbjct 818 GGGATAACATTATAGGATTT-CGGTCCTATTACGTTGGCCTTCGGGATCGGAGTAATGAT 876 Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250 ||| ||||| ||||||||| | ||||| || |||||||||||||||||||||||||| Sbjct 877 TAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTAT 936 Query 251 TGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAA 310 ||||| ||| ||||||||||| || |||||||||||||||||||||| |||||||| Sbjct 937 GAAAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAA 995 Query 311 GTTAGGGG 318 ||| |||| Sbjct 996 GTTGGGGG 1003 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 914903218944