Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20azukicola_20[genbank_20GCA_5F001680625.1_202016-07-06] 32,428 sequences; 51,307,981 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq5 731 0.0 seq25594 158 5e-36 >seq5 Length=7701 Score = 731 bits (810), Expect = 0.0 Identities = 565/663 (85%), Gaps = 10/663 (2%) Strand=Plus/Plus Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82 ||| |||||||||||||||||||||| |||||||||||| ||||||||||||||||| || Sbjct 738 TGTAAAGCTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAATGGGAGGTATAT 797 Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 798 GTCTTCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 857 Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202 ||||||| |||||| |||||||||||||||| |||||||||||||||||||||||||||| Sbjct 858 TGAAAAGAACTTTGAAAAGAGAGTTAAAAAGTACGTGAAATTGTTGAAAGGGAAGCGCTT 917 Query 203 GCAACCAGACTTGCCCGCAGTTGCTCAACC-GGCCCCTCGGCCGGTGCACTCTTCTGCGG 261 | |||||||||| | |||| ||| || || ||| | |||||||||||| | | Sbjct 918 GTGACCAGACTTGGGCTTGGTTGATCATCCAGGGTTCTC-CCTGGTGCACTCTTCCG-GC 975 Query 262 TCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGG 321 |||||||||||||| | | | | |||||||||| |||||||||||| |||| |||| Sbjct 976 CCAGGCCAGCATCAGTTTGCCCCGGGGGATAAAGGCGTCGGGAATGTGGCTCCCTCCGGG 1035 Query 322 GGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCTAG 381 | |||||||||||||| | | ||| | | | |||||||||| ||||| || || Sbjct 1036 GAGTGTTATAGCCCGGCGCGCAATACCCTGAGGC-GGACTGAGGTTCGCGCATTCGCAAG 1094 Query 382 GATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACAT 441 ||||||||||||||||| | || | ||||||||| |||||||||||||||||| | | Sbjct 1095 GATGCTGGCGTAATGGTCATCAGTGACCCGTCTTGAAACACGGACCAAGGAGTC-GTCTT 1153 Query 442 C-TATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAA 500 | |||||||||||| ||||||||||||| | ||||||||||||||||||| ||||| || Sbjct 1154 CGTATGCGAGTGTTCGGGTGTCAAACCCCTACGCGTAATGAAAGTGAACGCAGGTGAGA- 1212 Query 501 CCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCAT 560 | || ||| ||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 1213 ---GCTTCGGCGCATCATCGACCGATCCTGATGTTTTCGGATGGATTTGAGTAAGAGCAT 1269 Query 561 AGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACT 620 | | |||||||||||| ||||||||||||||| ||||||||||||||||||||||| Sbjct 1270 ACGGGGCCGGACCCGAAAGAAGGTGAACTATGCCTGTATAGGGTGAAGCCAGAGGAAACT 1329 Query 621 CTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGG 680 ||||||||||||||||||||||||| ||||||||||||||||||||| |||| || |||| Sbjct 1330 CTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATATGGGCATGGGGG 1389 Query 681 CGA 683 ||| Sbjct 1390 CGA 1392 >seq25594 Length=311 Score = 158 bits (174), Expect = 5e-36 Identities = 134/165 (81%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 35 TCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94 || |||||||| |||||||||||||||||| | || ||| ||| |||| | || || || Sbjct 216 TCTACGAGTCGGGTTGTTTGGGAATGCAGCCCAAATCGGGCGGTGAATTCCGTCCAAGGC 157 Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154 |||||| ||| |||||||||||||| ||||||| | || ||||||||||||| |||| Sbjct 156 TAAATACGGGCGAGAGACCGATAGCGAACAAGTACCGCGAGGGAAAGATGAAAAGGACTT 97 Query 155 TGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199 || ||||||||| ||| || | ||||||||| | ||||||||| Sbjct 96 TGAAAAGAGAGTCAAAGAGTGCTTGAAATTGTCGGGAGGGAAGCG 52 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079304419400