Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20azukicola_20[genbank_20GCA_5F001680625.1_202016-07-06]
32,428 sequences; 51,307,981 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq5 199 7e-49
seq28990 114 2e-23
>seq5
Length=7701
Score = 199 bits (220), Expect = 7e-49
Identities = 113/115 (98%), Gaps = 0/115 (0%)
Strand=Plus/Minus
Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3776 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 3717
Query 152 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTT 206
|||||||||||||||||| ||||||||||||||||||||| ||||||||||||||
Sbjct 3716 ATCGAAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTT 3662
Score = 159 bits (176), Expect = 6e-37
Identities = 93/95 (98%), Gaps = 1/95 (1%)
Strand=Plus/Minus
Query 202 CAGTT-ATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAG 260
||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 3279 CAGTTCATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATGTCGAGGGACTAAAG 3220
Query 261 GATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295
|||||||||||||||||||||||||||||||||||
Sbjct 3219 GATCGATAGGCCACACTTTCATGGTTTGTATTCAC 3185
Score = 145 bits (160), Expect = 1e-32
Identities = 88/92 (96%), Gaps = 1/92 (1%)
Strand=Plus/Minus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
|||||||| |||||||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct 4225 TACTAAGCTGAATTACCATTGCGGCGA-GGTCATCAGTAGGGTAAAACTAACCTGTCTCA 4167
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATT 92
|||||||||||||||||||||||||||||||
Sbjct 4166 CGACGGTCTAAACCCAGCTCACGTTCCCTATT 4135
>seq28990
Length=228
Score = 114 bits (126), Expect = 2e-23
Identities = 79/88 (90%), Gaps = 1/88 (1%)
Strand=Plus/Minus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
||||| | ||||||| |||| | | || |||||||||||||||||||||||||||||||
Sbjct 88 TACTAGGTTGAATTACTATTGCGAC-ACTGTCATCAGTAGGGTAAAACTAACCTGTCTCA 30
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCC 88
|||||||||||||||||||||||||||
Sbjct 29 CGACGGTCTAAACCCAGCTCACGTTCCC 2
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854122935168
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |