Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20azukicola_20[genbank_20GCA_5F001680625.1_202016-07-06]
32,428 sequences; 51,307,981 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq5 443 4e-122
seq4919 304 2e-80
>seq5
Length=7701
Score = 443 bits (490), Expect = 4e-122
Identities = 284/309 (92%), Gaps = 2/309 (1%)
Strand=Plus/Plus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79
|| ||||||||||||||||||||||||| | |||||||| | ||| ||||||||||
Sbjct 7049 GAACGAGACCTTAACCTGCTAAATAGCCCGTATTGCTTTGGCAGTACGCTGGCTTCTTAG 7108
Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 7109 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 7168
Query 140 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCG 199
|||||||||||||||||||||||||||||||| |||||| ||||| | | |||||||||
Sbjct 7169 GATGTTCTGGGCCGCACGCGCGCTACACTGACGGAGCCAGCGAGT--ACCTCCTTGGCCG 7226
Query 200 GAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 259
|||| | ||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 7227 AAAGGCCCGGGTAATCTTGTTAAACTCCGTCGTGCTGGGGATAGAGCATTGCAATTATTG 7286
Query 260 CTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTG 319
|||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||
Sbjct 7287 CTCTTCAACGAGGAATCCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCCCTG 7346
Query 320 CCCTTTGTA 328
|||||||||
Sbjct 7347 CCCTTTGTA 7355
>seq4919
Length=483
Score = 304 bits (336), Expect = 2e-80
Identities = 261/318 (82%), Gaps = 16/318 (5%)
Strand=Plus/Plus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCG------CTTTGGCGGGTCGCCGGCT 73
|| |||||||| | |||||||| |||| | || | || |||| || |||
Sbjct 124 GAACGAGACCTCAGCCTGCTAACTAGCTATGCGGAGGTATCCCTTCGCGG----CCAGCT 179
Query 74 TCTTAGAGGGACTATCGGC---TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
|||||||||||||| |||| | | |||| ||||||||||||||||||||||||||||
Sbjct 180 TCTTAGAGGGACTA-CGGCCTTTTAGGCCGC-GGAAGTTTGAGGCAATAACAGGTCTGTG 237
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190
|||||||||||||||||||||||||||||||||||||||| | ||||||| | ||
Sbjct 238 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGTATTCAACGAGCTTATAG 297
Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250
||||||||| ||| | |||||||||| | ||| | ||||| |||||||||| |||||
Sbjct 298 CCTTGGCCGACAGGCCCGGGTAATCTT-TGAAATTTCATCGTGATGGGGATAGATCATTG 356
Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310
||||| ||| ||||||||||||||| ||||||||||||| ||||||||| |||||||| |
Sbjct 357 CAATTGTTGGTCTTCAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGCTCGCGTTGACT 416
Query 311 ACGTCCCTGCCCTTTGTA 328
||||||||||||||||||
Sbjct 417 ACGTCCCTGCCCTTTGTA 434
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 946892841984
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |