Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20brasiliense_20[genbank_20GCA_5F001680685.1_202016-07-06] 22,229 sequences; 49,382,781 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq9186 394 1e-107 seq3 212 9e-53 seq18870 118 2e-24 seq20750 82.4 1e-13 >seq9186 Length=448 Score = 394 bits (436), Expect = 1e-107 Identities = 242/254 (95%), Gaps = 3/254 (1%) Strand=Plus/Plus Query 3 ACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCCT 62 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| Sbjct 44 ACAAAGGGCAGGGACGTAGTCAACGCGAGCT-GATGACTCGCGCTTACTAGGAATT-CCT 101 Query 63 CGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTACC 122 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 102 CGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTACC 161 Query 123 CGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCC 182 ||| |||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct 162 CGGGCCTGTCGGCCAAGGCTATAAGCTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCC 221 Query 183 CAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAAGGC 242 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 222 CAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGCGGCCTAAAAGGC 281 Query 243 CAT-CTCCCTCGAA 255 | | |||||| || Sbjct 282 CGTAGTCCCTCTAA 295 >seq3 Length=8137 Score = 212 bits (234), Expect = 9e-53 Identities = 173/205 (84%), Gaps = 5/205 (2%) Strand=Plus/Minus Query 2 TACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCC 61 |||||||||||||||| || ||||||| |||| |||||| ||||||||||| ||| || Sbjct 3266 TACAAAGGGCAGGGACATAATCAACGCAAGCTA-ATGACTTACGCTTACTAGGGATT-CC 3209 Query 62 TCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATTA 120 || || |||| ||| |||| ||||| |||||||||| ||||| | | ||| | ||||||| Sbjct 3208 TCATTAAAGAGCAATAATTACAATGCTCTATCCCCAGCACGACGGAGTTTAACAAGATTA 3149 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 ||||| ||| |||||||||| | || |||| || | | |||||||||||||||||||| Sbjct 3148 CCCGGGCCTTTCGGCCAAGGAGGTA--CTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCGG 3091 Query 181 CCCAGAACATCTAAGGGCATCACAG 205 ||||||||||||||||||||||||| Sbjct 3090 CCCAGAACATCTAAGGGCATCACAG 3066 >seq18870 Length=223 Score = 118 bits (130), Expect = 2e-24 Identities = 103/126 (82%), Gaps = 3/126 (2%) Strand=Plus/Plus Query 81 GCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATTACCCGGACCTGTCGGCCAAG 139 ||| || ||| ||||| ||||| | | ||| | |||||||||||| ||| ||||||||| Sbjct 1 GCAGTGCGCTACCCCCAGCACGACGGAGTTTAACAAGATTACCCGGGCCTTTCGGCCAAG 60 Query 140 GTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCA 199 | | || |||| || | ||||||| ||||||||||||||||||||||||||||||| | Sbjct 61 GAGGTA--CTCGCTGGCTCCATCAGTATAGCGCGCGTGCGGCCCAGAACATCTAAGGGTA 118 Query 200 TCACAG 205 ||| || Sbjct 119 TCATAG 124 >seq20750 Length=245 Score = 82.4 bits (90), Expect = 1e-13 Identities = 45/45 (100%), Gaps = 0/45 (0%) Strand=Plus/Minus Query 184 AGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 245 AGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 201 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751838061735