Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20brasiliense_20[genbank_20GCA_5F001680685.1_202016-07-06] 22,229 sequences; 49,382,781 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq3 473 2e-131 seq8720 233 4e-59 seq382 215 9e-54 seq1994 150 3e-34 seq1112 113 8e-23 >seq3 Length=8137 Score = 473 bits (524), Expect = 2e-131 Identities = 294/314 (94%), Gaps = 1/314 (0%) Strand=Plus/Plus Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGA 64 |||||||||||||||||||| |||| ||| || |||||||||||||||||||| |||||| Sbjct 1471 TGGTCCGGCCGGGCCTTTCCCTCTGTGGAACCCCATGCCCTTCACTGGGTGTGGCGGGGA 1530 Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 124 ||||||||||||| |||||||||||||||| || | |||||||| ||||||||||||| Sbjct 1531 AACAGGACTTTTACTGTGAAAAAATTAGAGTGCTCCAGGCAGGCCTATGCTCGAATACAT 1590 Query 125 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 184 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 1591 TAGCATGGAATAATAGAATAGGACGTGTGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 1650 Query 185 AATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 244 ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| Sbjct 1651 AATGATTAATAGGGACAGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 1710 Query 245 ATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGA 304 ||||||||||||||||||||||||||||| || ||||||||||||||||||||||| || Sbjct 1711 ATTTATTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAG-GA 1769 Query 305 ACGAAAGTTAGGGG 318 |||||||||||||| Sbjct 1770 ACGAAAGTTAGGGG 1783 >seq8720 Length=885 Score = 233 bits (258), Expect = 4e-59 Identities = 203/248 (82%), Gaps = 3/248 (1%) Strand=Plus/Minus Query 72 CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCAT 130 || |||||||||| ||||||||||| |||||||| |||| |||| | |||||||||||| Sbjct 442 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCAT 383 Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190 || |||| | |||||| | |||| ||||| ||||| | ||| || |||||||| Sbjct 382 GGGATAACATTATAGGATTT-CGGTCCTATTACGTTGGCCTTCGGGATCGGAGTAATGAT 324 Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250 ||| ||||| ||||||||| | ||||| || |||||||||||||||||||||||||| Sbjct 323 TAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTAT 264 Query 251 TGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAA 310 ||||| ||| ||||||||||| || |||||||||||||||||||||| |||||||| Sbjct 263 GAAAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAA 205 Query 311 GTTAGGGG 318 ||| |||| Sbjct 204 GTTGGGGG 197 >seq382 Length=7672 Score = 215 bits (238), Expect = 9e-54 Identities = 235/311 (76%), Gaps = 1/311 (0%) Strand=Plus/Minus Query 8 TCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGAGCC 67 ||||||||||||||||| ||| | || || ||||||||| ||| | |||||| Sbjct 4526 TCCGGCCGGGCCTTTCCCTCTATAAAACCTTATACCCTTCACTAGGTATAGCGGGGAAAT 4467 Query 68 AGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAG 127 |||||||||| | | ||||||||| ||| | | | |||||| | ||| |||| |||| Sbjct 4466 AGGACTTTTATTATAAAAAAATTAAAGTACTTTAGGTAGGCCTATACTCAAATATATTAA 4407 Query 128 CATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAAT 187 || |||||||||||||||| | |||||||||| || |||||||||| | |||| Sbjct 4406 TATAGAATAATAGAATAGGATATATAGTTCTATTTTATTAGTTTCTAGGATTACTATAAT 4347 Query 188 GATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATT 247 ||||||||||||| | ||||| | | |||| |||| | |||||| |||||||| | || Sbjct 4346 AATTAATAGGGATAATTAGGGGTATTAATATTTAATTATTAGAGGTAAAATTCTTAGGTT 4287 Query 248 TATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACG 307 |||| |||| ||| || | |||| || || |||||| |||| |||||| | ||| Sbjct 4286 TATTAAAGATTAATTATTATAAAAGTATTTACTAAGGATATTTTTATTAATTA-AGAATA 4228 Query 308 AAAGTTAGGGG 318 ||||||||||| Sbjct 4227 AAAGTTAGGGG 4217 >seq1994 Length=4706 Score = 150 bits (166), Expect = 3e-34 Identities = 216/303 (71%), Gaps = 1/303 (0%) Strand=Plus/Minus Query 16 GGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTT 75 ||||||||| | | || || || ||||| | | ||| | |||| |||||||| Sbjct 2273 GGCCTTTCCCTTTATAGAACCTTATACCCTTTATTAGGTATAGTAGGGAAATAGGACTTT 2214 Query 76 TACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGGAAT 135 || | | |||| |||| ||| || | | |||||| | || |||| |||| || |||| Sbjct 2213 TATTATAAAAATATTAAAGTATTTTAGGTAGGCCTATACTTAAATATATTAATATAGAAT 2154 Query 136 AATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATA 195 |||| |||| || | ||||||||| | |||||| ||| || |||| ||||||| Sbjct 2153 AATAAAATAAGATATATAATTCTATTTTATGAATTTCTAAGACTGCTATAATAATTAATA 2094 Query 196 GGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAG 255 |||||| | ||||| | | |||| |||| | |||||| |||||||| ||||||| ||| Sbjct 2093 GGGATAATTAGGGGTATTAATATTTAATTATTAGAGGTAAAATTCTTAAATTTATTAAAG 2034 Query 256 ACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAG 315 | ||| || | |||| || || |||||| |||| |||||| | ||| ||| ||| Sbjct 2033 ATTAATTATTATAAAAGTATTTACTAAGGATATTTTTATTAATTA-AGAATAAAAATTAA 1975 Query 316 GGG 318 ||| Sbjct 1974 GGG 1972 >seq1112 Length=4684 Score = 113 bits (124), Expect = 8e-23 Identities = 112/145 (77%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 154 GTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTC 213 ||| |||||| || |||||||| | | |||| ||||||||||||| | ||||| | Sbjct 2283 GTTTTATTTTATTAGTTTCTAGTATTACTATAATAATTAATAGGGATAATTAGGGGTATT 2224 Query 214 AGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGC 273 | |||| |||| | |||| | |||||||| |||||||| |||| |||||||| |||| Sbjct 2223 AATATTTAATTATTAGAGATAAAATTCTTAGATTTATTAAAGATTAACTACTATAAAAGT 2164 Query 274 GTTCACCAAGGATGTTTTCATTAAT 298 || || |||||| |||| |||||| Sbjct 2163 ATTTACTAAGGATATTTTTATTAAT 2139 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 914996560192