Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20brasiliense_20[genbank_20GCA_5F001680685.1_202016-07-06] 22,229 sequences; 49,382,781 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq5 731 0.0 seq3 536 5e-150 seq382 141 4e-31 seq18892 138 5e-30 seq2604 93.3 2e-16 seq6354 82.4 3e-13 seq1112 80.6 1e-12 >seq5 Length=2795 Score = 731 bits (810), Expect = 0.0 Identities = 565/663 (85%), Gaps = 10/663 (2%) Strand=Plus/Plus Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82 ||| |||||||||||||||||||||| |||||||||||| ||||||||||||||||| || Sbjct 477 TGTAAAGCTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAATGGGAGGTATAT 536 Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 537 GTCTTCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 596 Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202 ||||||| |||||| |||||||||||||||| |||||||||||||||||||||||||||| Sbjct 597 TGAAAAGAACTTTGAAAAGAGAGTTAAAAAGTACGTGAAATTGTTGAAAGGGAAGCGCTT 656 Query 203 GCAACCAGACTTGCCCGCAGTTGCTCAACC-GGCCCCTCGGCCGGTGCACTCTTCTGCGG 261 | |||||||||| | |||| ||| || || ||| | |||||||||||| | | Sbjct 657 GTGACCAGACTTGGGCTTGGTTGATCATCCAGGGTTCTC-CCTGGTGCACTCTTCCG-GC 714 Query 262 TCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGG 321 |||||||||||||| | | | | |||||||||| |||||||||||| |||| |||| Sbjct 715 CCAGGCCAGCATCAGTTTGCCCCGGGGGATAAAGGCGTCGGGAATGTGGCTCCCTCCGGG 774 Query 322 GGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCTAG 381 | |||||||||||||| | | ||| | | | |||||||||| ||||| || || Sbjct 775 GAGTGTTATAGCCCGGCGCGCAATACCCTGAGGC-GGACTGAGGTTCGCGCATTCGCAAG 833 Query 382 GATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACAT 441 ||||||||||||||||| | || | ||||||||| |||||||||||||||||| | | Sbjct 834 GATGCTGGCGTAATGGTCATCAGTGACCCGTCTTGAAACACGGACCAAGGAGTC-GTCTT 892 Query 442 C-TATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAA 500 | |||||||||||| ||||||||||||| | ||||||||||||||||||| ||||| || Sbjct 893 CGTATGCGAGTGTTCGGGTGTCAAACCCCTACGCGTAATGAAAGTGAACGCAGGTGAGA- 951 Query 501 CCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCAT 560 | || ||| ||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 952 ---GCTTCGGCGCATCATCGACCGATCCTGATGTTTTCGGATGGATTTGAGTAAGAGCAT 1008 Query 561 AGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACT 620 | | |||||||||||| ||||||||||||||| ||||||||||||||||||||||| Sbjct 1009 ACGGGGCCGGACCCGAAAGAAGGTGAACTATGCCTGTATAGGGTGAAGCCAGAGGAAACT 1068 Query 621 CTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGG 680 ||||||||||||||||||||||||| ||||||||||||||||||||| |||| || |||| Sbjct 1069 CTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATATGGGCATGGGGG 1128 Query 681 CGA 683 ||| Sbjct 1129 CGA 1131 >seq3 Length=8137 Score = 536 bits (594), Expect = 5e-150 Identities = 517/658 (79%), Gaps = 8/658 (1%) Strand=Plus/Plus Query 27 AAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCT 86 ||||||||| || ||||||||| |||| ||||| ||||||||||||||||| || ||| Sbjct 4161 AAGCTCCTTTGATGAGTCGAGTAGTTTAGGAATATTGCTCTAAATGGGAGGTATATATCT 4220 Query 87 TCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAA 146 |||||||||||||| ||| |||||||||||||||| || ||||||||||||||||| || Sbjct 4221 TCTAAAGCTAAATACCGGCTAGAGACCGATAGCGCATAAATAGAGTGATCGAAAGATAAA 4280 Query 147 AAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAA 206 ||| ||||| |||||||||||||||| |||||||||| ||||||||||||||||| | Sbjct 4281 AAGAACTTTAAAAAGAGAGTTAAAAAGTACGTGAAATTATTGAAAGGGAAGCGCTTATGA 4340 Query 207 CCAGACTTGCCCGCAGTTGCTCAACC-GGCCCCTCGGCCGGTGCACTCTTCTGCGGTCAG 265 | |||||| | ||||| ||| || || ||| | ||||||||||||| | || Sbjct 4341 CTAGACTTAGGCTTAGTTGATCATCCAGGGTTCTC-CCTAGTGCACTCTTCTG-GCCTAG 4398 Query 266 GCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGT 325 || || ||||| | | | |||||||||| ||||||| |||| |||| ||||| || Sbjct 4399 GCTAGTATCAGTTTACCCCGGGGGATAAAGGCATCGGGAATATGGCTCCCTCCGGGGAGT 4458 Query 326 GTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCTAGGATG 385 ||||||||||| | | ||| | | | ||||| |||| ||||| | ||||| Sbjct 4459 ATTATAGCCCGGCGCGTAATACCCTAAGGC-GGACTAAGGTTCGCGCATTCGTAAGGATA 4517 Query 386 CTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTAT 445 || ||||||| ||| | || | |||||||| || ||||||||||||||| | ||| Sbjct 4518 CTAGCGTAATAGTTATTAGTGACCCGTCTTAAAATACGGACCAAGGAGTCGTCTTTATAT 4577 Query 446 GCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGT 505 ||||| || |||||| |||||| | |||||||| ||||| |||| ||||| || | Sbjct 4578 ACGAGTATTCGGGTGTTAAACCCCTACGCGTAATAAAAGTAAACGTAGGTGAGA----GC 4633 Query 506 GAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTG 565 || ||| |||||||||||||||| | ||||||||||||| |||||||||||| | Sbjct 4634 TTCGGCGCATTATCGACCGATCCTGATATTTTCGGATGGATTTAAGTAAGAGCATATGGG 4693 Query 566 TTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGT 625 ||||| ||||| |||||||||| ||| ||| ||| ||||||||||||||||| || Sbjct 4694 GCCGGACCTAAAAGAAGGTGAACTATACCTATATAAGGTAAAGCCAGAGGAAACTCTAGT 4753 Query 626 GGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||||||||||||||||||| |||| ||||||||||| |||| | || |||||||||| Sbjct 4754 GGAGGCTCGCAGCGGTTCTAACGTGTAAATCGATCGTTAAATATAGGCATAGGGGCGA 4811 >seq382 Length=7672 Score = 141 bits (156), Expect = 4e-31 Identities = 137/176 (78%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 27 AAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCT 86 ||||||||| | ||| ||| |||| ||||| | |||||||| ||||||| || ||| Sbjct 2272 AAGCTCCTTTAATAAGTTAAGTAGTTTAGGAATACTACTCTAAATAGGAGGTATATATCT 2213 Query 87 TCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAA 146 |||||||||||||| ||| |||||| |||| | || || ||| || ||||||| || Sbjct 2212 TCTAAAGCTAAATACCGGCTAGAGACTAATAGTATATAAATAAAGTAATTGAAAGATAAA 2153 Query 147 AAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202 ||| ||||| ||| ||| |||||||| | | ||||| || |||||||||||||| Sbjct 2152 AAGAACTTTAAAAAAAGAATTAAAAAGTATATAAAATTATTAAAAGGGAAGCGCTT 2097 Score = 113 bits (124), Expect = 2e-22 Identities = 125/167 (75%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 517 ATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGA 576 ||||| |||||| || | ||||||| |||| ||||||| ||| | |||| | Sbjct 1788 ATCGATTGATCCTAATATTTTCGGATAAATTTAAGTAAGAATATATAAGGCTAGACCTAA 1729 Query 577 AAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCA 636 |||| ||| || ||| ||| ||||||| |||| |||||||||| | | |||||||||| Sbjct 1728 AAGAAGGTAAATTATACCTATATAGGGTAAAGCTAGAGGAAACTTTAATAGAGGCTCGCA 1669 Query 637 GCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 |||||||| | |||||||| | |||| | ||||||||||||| Sbjct 1668 GCGGTTCTAATATATAAATCGATTATTAAATATAGGTATAGGGGCGA 1622 >seq18892 Length=223 Score = 138 bits (152), Expect = 5e-30 Identities = 112/136 (82%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 35 TCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94 || |||||||| |||||||||||||||||| | || ||| ||| |||| | || || || Sbjct 71 TCTACGAGTCGGGTTGTTTGGGAATGCAGCCCAAATCGGGCGGTGAATTCCGTCCAAGGC 130 Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154 |||||| ||| |||||||||||||| ||||||| | || ||||||||||||| |||| Sbjct 131 TAAATACGGGCGAGAGACCGATAGCGAACAAGTACCGCGAGGGAAAGATGAAAAGGACTT 190 Query 155 TGGAAAGAGAGTTAAA 170 || ||||||||| ||| Sbjct 191 TGAAAAGAGAGTCAAA 206 >seq2604 Length=2823 Score = 93.3 bits (102), Expect = 2e-16 Identities = 134/189 (71%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 27 AAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCT 86 ||||||||| | | | ||| ||| ||||| |||||||| | || || || ||| Sbjct 1075 AAGCTCCTTTAATAAATTAAGTAATTTAGGAATATTACTCTAAATAGAAGATATATATCT 1134 Query 87 TCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAA 146 |||| ||||||||| | || ||| | ||| | | || |||||| || ||| || || Sbjct 1135 TCTATAGCTAAATACTAGCTAGAAATTAATAATGTATAAATAGAGTAATTAAAAAATAAA 1194 Query 147 AAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAA 206 ||| | || ||||||||||||||| | | ||||||| ||||||||| ||| || Sbjct 1195 AAGAATATTAAAAAGAGAGTTAAAAAATATATAGAATTGTTAAAAGGGAAGTACTTATAA 1254 Query 207 CCAGACTTG 215 | | ||||| Sbjct 1255 CTAAACTTG 1263 >seq6354 Length=2535 Score = 82.4 bits (90), Expect = 3e-13 Identities = 108/145 (74%), Gaps = 5/145 (3%) Strand=Plus/Minus Query 206 ACCAGACTTGCCCGCAGTTGCTCAACC-GGCCCCTCGGCCGGTGCACTCTTCTGCGGTC- 263 |||||||||| | |||| ||| || || ||| | ||||| |||||| ||||| Sbjct 2445 ACCAGACTTGGGCTTGGTTGATCACCCAGGGTTCTCT-CTGGTGCGCTCTTC--CGGTCC 2389 Query 264 AGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGG 323 ||||||||||||| | | | | |||||||| | ||||||| |||| |||| | ||| Sbjct 2388 AGGCCAGCATCAGTTTGCCCCGGGGGATAAAGACGTCGGGAATCTGGCTCCCTCCAGGGA 2329 Query 324 GTGTTATAGCCCGGGGTGGAATGCG 348 |||||||||||| | ||| ||| || Sbjct 2328 GTGTTATAGCCCAGCGTGTAATACG 2304 >seq1112 Length=4684 Score = 80.6 bits (88), Expect = 1e-12 Identities = 77/99 (78%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 75 AGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGA 134 ||||| || ||||||||||||||||||| || |||| ||| | || || ||| | Sbjct 103 AGGTATATATCTTCTAAAGCTAAATATTAGCTAGAGGTTAATAATATATAAATAAAGTAA 44 Query 135 TCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAG 173 | |||||| ||||| ||||| |||||||||||||||| Sbjct 43 TTAAAAGATAAAAAGAACTTTAAAAAGAGAGTTAAAAAG 5 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079523187950